Ictalurus punctatus (channel catfish): 108272658
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Entry
108272658 CDS
T04658
Name
(RefSeq) SNARE-associated protein Snapin
KO
K20002
SNARE-associated protein Snapin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108272658
Membrane trafficking [BR:
ipu04131
]
SNARE
SNARE associated proteins
Others
108272658
Endosome - Lysosome transport
Arf GTPases and associated proteins
BLOC-one-related complex (BORC)
108272658
Others
BLOC-1 complex
108272658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snapin_Pallidin
DUF3496
WHD_E2F_TDP
DUF1664
Motif
Other DBs
NCBI-GeneID:
108272658
NCBI-ProteinID:
XP_017336706
Ensembl:
ENSIPUG00000018486
UniProt:
W5UE58
LinkDB
All DBs
Position
12:28517989..28519900
Genome browser
AA seq
129 aa
AA seq
DB search
MAALAVVETPSGKDAIAEGLMDLLKPAVQQLDLHVHAVRESQVELREHIDNLATELCRIN
EHQKVALDLDPYVKKLLNARRRVVLVNNILQNAQERLRRLNHNVAKETARRKTMLETSGA
FSTRSPSKP
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctcgcagtggtggaaactccgtctggaaaagatgccattgccgaagggctt
atggatctgttgaaaccagcagtgcagcagcttgatctacatgtgcatgcagtgagggag
agtcaagtggagctccgagaacacattgacaacttggcaactgagctgtgtagaattaac
gaacaccagaaagtcgccctggacttggatccctatgtaaagaaactgctcaatgccagg
cgcagagtggttctggttaataacatcctacagaatgcacaagaacgcttacggaggttg
aaccataacgtggcgaaggagacggcgcgccggaaaaccatgcttgaaacgtccggagcg
ttttccactcggtctcctagcaagccgtga
DBGET
integrated database retrieval system