KEGG   Ictalurus punctatus (channel catfish): 108272658
Entry
108272658         CDS       T04658                                 
Name
(RefSeq) SNARE-associated protein Snapin
  KO
K20002  SNARE-associated protein Snapin
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108272658
Membrane trafficking [BR:ipu04131]
 SNARE
  SNARE associated proteins
   Others
    108272658
 Endosome - Lysosome transport
  Arf GTPases and associated proteins
   BLOC-one-related complex (BORC)
    108272658
  Others
   BLOC-1 complex
    108272658
SSDB
Motif
Pfam: Snapin_Pallidin DUF3496 WHD_E2F_TDP DUF1664
Other DBs
NCBI-GeneID: 108272658
NCBI-ProteinID: XP_017336706
Ensembl: ENSIPUG00000018486
UniProt: W5UE58
LinkDB
Position
12:28517989..28519900
AA seq 129 aa
MAALAVVETPSGKDAIAEGLMDLLKPAVQQLDLHVHAVRESQVELREHIDNLATELCRIN
EHQKVALDLDPYVKKLLNARRRVVLVNNILQNAQERLRRLNHNVAKETARRKTMLETSGA
FSTRSPSKP
NT seq 390 nt   +upstreamnt  +downstreamnt
atggcggcgctcgcagtggtggaaactccgtctggaaaagatgccattgccgaagggctt
atggatctgttgaaaccagcagtgcagcagcttgatctacatgtgcatgcagtgagggag
agtcaagtggagctccgagaacacattgacaacttggcaactgagctgtgtagaattaac
gaacaccagaaagtcgccctggacttggatccctatgtaaagaaactgctcaatgccagg
cgcagagtggttctggttaataacatcctacagaatgcacaagaacgcttacggaggttg
aaccataacgtggcgaaggagacggcgcgccggaaaaccatgcttgaaacgtccggagcg
ttttccactcggtctcctagcaagccgtga

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