Ictalurus punctatus (channel catfish): 108272680
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Entry
108272680 CDS
T04658
Symbol
tomm40
Name
(RefSeq) mitochondrial import receptor subunit TOM40 homolog
KO
K11518
mitochondrial import receptor subunit TOM40
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108272680 (tomm40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108272680 (tomm40)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108272680 (tomm40)
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial protein import machinery
Outer membrane
Transporter outer membrane (TOM) complex
108272680 (tomm40)
Transporters [BR:
ipu02000
]
Other transporters
Primary active transporters [TC:
3
]
108272680 (tomm40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Porin_3
Motif
Other DBs
NCBI-GeneID:
108272680
NCBI-ProteinID:
XP_017336767
Ensembl:
ENSIPUG00000001921
UniProt:
W5UBW7
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All DBs
Position
1:6309135..6318627
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AA seq
339 aa
AA seq
DB search
MGSVLAATSPNPPASGSGSSQGGPGLTVPPGFTMPTMPSSLGTGAQAGTDTEPSLLNPGT
FEECHRKCKEVFPLQMEGVRLVVNKGLSNHFQVSHTITLSTMGESGYRFSATYVGSKQTG
PAESFPVMVGDMDNTGSLNAQFIHQLTTHVRSKVALQTQQHKFVNWQCDTEYRGDDFTAA
VTVGNPDVLVGSGILVAHYLQSLSPALALGGELVYHRRPGEEGTVTSLVGRYTGTNYVAT
LTVGGAGAHASYYHKANDQLQVGVEFEASTRLQETSMTFGYQVDLPKANLQFKGSLDSNW
VVGATLEKKLLPLPLSLALGAFLNHRKNKFQCGFGVTIG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtgtgttggctgccacttccccaaacccccctgcttcaggcagtggtagcagt
caggggggtccaggcctgacagtgcctcccggcttcaccatgcccaccatgccgtcgtct
ctgggcaccggcgcacaggctggcaccgacaccgagccgtctctcctcaacccaggcaca
tttgaggagtgccatcggaaatgcaaagaggtcttcccattgcagatggagggcgtgcga
ctggtggtcaacaagggtttaagcaatcacttccaggtgagccacacaattacactgagc
accatgggagaatccggctacaggttttcagccacatacgttgggagcaagcagaccggt
cctgctgagtcatttccagtaatggttggtgacatggataacacgggcagtctcaacgca
cagtttatccaccagttgaccacacacgtacgctccaaggtggctctgcagacacagcaa
cacaagtttgtgaactggcagtgtgacacagagtaccgtggagatgacttcactgctgct
gtaacagtgggcaatccagacgttcttgttggatctggtattttagtggctcattacctt
cagtctctgtcacctgccttggctttggggggtgagctggtgtaccacaggagacccgga
gaggagggcacggtcacttcattagtgggcagatacacaggcaccaattacgtggccacg
ctgactgtcggaggagcaggtgctcacgcatcatactaccacaaagccaatgatcagttg
caagttggggtggagtttgaggcgagcacacgcctgcaagaaacaagtatgacttttggc
tatcaggtggacctgcccaaggccaaccttcaatttaaaggttcattagacagtaactgg
gtggtcggggctacgctggagaagaagctgctgccactcccgttgtcgctggctctcggc
gccttcctgaaccatcgcaaaaacaagtttcaatgcggttttggagttactattggttag
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