Ictalurus punctatus (channel catfish): 108272696
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Entry
108272696 CDS
T04658
Name
(RefSeq) ATP-binding cassette sub-family F member 1 isoform X1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ipu03012
]
108272696
Translation factors [BR:
ipu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108272696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
ABC_tran_Xtn
NACHT
AAA_28
AAA_24
AAA_14
AAA_5
AAA_22
AAA_18
AAA_16
AAA
MMR_HSR1
RsgA_GTPase
AAA_25
cobW
AAA_23
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
108272696
NCBI-ProteinID:
XP_017336798
Ensembl:
ENSIPUG00000013844
UniProt:
A0A2D0S212
LinkDB
All DBs
Position
12:24690767..24713455
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AA seq
863 aa
AA seq
DB search
MPKKSKDVAEWEGDEESQSDKVVKKGKKDKKGKKSFFDELSSESKAEKTEEPAVKETQGK
QPQKKKKDRRKGKAADVEDDDEDVMQRLKKLSVQPSDEEEEEVIAAPVKGGKRNKGGNIF
AALSQGQSDEEDDADGDDDDIDDDDKPKNKKSSKEVSRGKKNDKAKTKKSKGSDEEPDEE
LEKKVENDKKGVKNNKKTGSRASKDEDEEMEEKPQKAAVKKEQPKRGKPARQPPSEDEEE
KSDDNDTMRSAEDALVAEQSKEQQEDPYANLSKKEKKKKKKLMEYERQVASVRAQNATEG
DFSVSQAELSSRQAMLENASDIKLERFSISAHGKELFVNADLLIVAGRRYGLVGPNGKGK
TTLLKHISNRALSIPPNIDVLLCEQEVVADDTPAVQAVLKADTRRLKLLEEEKRLQALLE
KGEDSASERLEKVYEELRAIGAAAAEPKARRILAGLGFTSEMQNRPTKKFSGGWRMRVSL
ARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQSWKKTLLIVSHDQSFLDEVCTDIIHLD
NQKLYYYRGNYLTFKKMYVQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEVLTRK
QQKGKKKGQEEESHEAPELLKRPKEYTVKFTFPNPPPLSPPILGLYSVDFGYVGQKPLFR
NVEFGIDMESRICIVGPNGVGKSTLLLLLTGKLTPTKGEMRMNHRLKVGFFNQQYADQLN
MEESPTEYLQRNFNLPYQDSRKCLGRFGLESHAHTIQISKLSGGQKARVVFAELSCRQPD
VLILDEPTNNLDIESIDALSEAINEYKGAVIIVSHDARLITETQCQLWVVENRSINNIDG
DFEDYKREVLEALGETLVNKQKE
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaaatctaaagatgtggcggagtgggagggagacgaggaatcccagtcagac
aaagttgtcaagaaaggaaagaaagacaagaaagggaagaagagtttcttcgatgagctg
tcctcggaaagtaaggcagagaagactgaagagccagcagtgaaagagacacaaggaaag
cagcctcaaaagaaaaagaaggaccggcggaaagggaaagctgcggacgtggaggatgac
gatgaagacgtcatgcagcgactcaagaaactgtctgtccaaccaagcgatgaggaagag
gaagaggtaatagcagctcctgtgaaaggtggaaagagaaacaagggtggcaacatattc
gctgccctgagccaggggcagagtgatgaagaggacgatgcagatggtgacgatgacgac
atcgatgatgatgataaacctaaaaataagaaaagctctaaggaggtttccagaggaaag
aaaaatgataaggctaagactaagaaatctaagggatctgatgaggaacctgatgaggag
ctggagaaaaaggttgagaatgacaagaagggggtgaagaacaacaagaaaacaggcagt
agagcatctaaggacgaggatgaggagatggaggaaaaacctcagaaggctgctgtaaag
aaagaacagccaaagagaggcaagcctgctcggcaacctcctagtgaggatgaggaagag
aaaagcgatgacaatgacaccatgaggagtgcagaggacgctcttgttgcagagcagagt
aaagagcagcaggaagacccctacgccaacctgagtaaaaaggagaagaagaagaaaaag
aagctgatggagtacgagcggcaggtggctagtgtccgtgctcagaacgccacagaggga
gatttctcagtctctcaggctgagctgtcgtcaaggcaagccatgctggagaacgcctct
gatataaagctggagagattcagcatctcggctcacgggaaggagctttttgtcaacgct
gatcttctgatcgtggccggtcgccgctacggtctggtcggaccaaacgggaaaggaaaa
accacgttactgaagcacatttccaacagagctctcagcattcctcctaatatcgatgtg
ctgctctgtgaacaagaggtggtcgctgatgacactccggccgtgcaggctgtgctgaag
gcggacacgaggcgcctgaagttgctggaggaggagaagaggctgcaggccttgcttgag
aagggcgaggacagtgcctctgagagactagagaaggtgtatgaggagctgagggcaatc
ggagcagcggcagcagagcccaaggctcgcaggatcctggctggtttgggcttcacctct
gaaatgcagaacagacccactaagaagttttcaggtggctggaggatgagagtatcactc
gccagagctctgttcatggagcccaccctgttgatgctggacgagccaaccaaccacctc
gacctcaatgctgtcatctggctcaacaactatctgcagagctggaagaagaccctgctg
attgtgtcccacgaccagagtttcttagacgaagtctgtacagatatcattcacttggac
aaccagaaactctattactacaggggcaactacttgacgtttaagaagatgtacgtgcag
aagcaaaaggagctcctgaagcagtatgagaaacaggagaaaaagctgaaagagctgaaa
gctggaggaaaatccactaaacaagctgagaaacaaacaaaggaggttttgactaggaag
cagcagaaaggcaagaagaagggacaggaagaggaaagtcacgaggccccagagctcctg
aaaagacctaaagaatacaccgtgaagttcacttttccaaacccaccgcctctctctcca
cccattcttggcctctacagtgtggactttggctacgttggtcagaagcctctgttcaga
aatgttgaatttggtattgatatggagtctcgaatttgtatagttggaccaaacggtgtt
ggaaagagtacactcctacttctgctgacagggaagttgactcctaccaaaggcgagatg
aggatgaatcaccgcttgaaagtgggcttcttcaaccagcagtatgctgatcagctgaac
atggaggagtctcccacagagtatctgcagaggaatttcaatctgccataccaggacagc
aggaagtgtctcggccgcttcggtctagagagccacgcgcacactatacagatttctaaa
ctctctggcggccagaaagcaagagtggtatttgctgaactttcttgtcgccaaccggac
gtcctgattttggacgagcccaccaacaacctggacattgagtcaatcgatgctttatca
gaagccatcaatgaatacaaaggagctgtgatcatcgtgagccacgatgcccggttgatt
actgagactcagtgccagttgtgggtggtggaaaaccggtcgataaacaacatcgacggt
gacttcgaagactacaagagagaagtgctggaggctcttggagaaacgctggttaacaag
caaaaagagtga
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