Ictalurus punctatus (channel catfish): 108272714
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Entry
108272714 CDS
T04658
Symbol
celf3a
Name
(RefSeq) CUGBP Elav-like family member 3 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108272714 (celf3a)
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108272714 (celf3a)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
108272714
NCBI-ProteinID:
XP_053540291
Ensembl:
ENSIPUG00000008218
UniProt:
A0A9F7RDR5
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Position
12:19079827..19119225
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AA seq
509 aa
AA seq
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MSRAHGLSRSTRTCSAWQQSAQCSATCNARLFEGTLWEAPDLVKEEEEEEEAESPLSPMK
EPDAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESAL
KAQNALHEQKTLPGMNRPIQVKPADSEGRGDRKLFVGMLGKQQSDTDVRKMFEPFGSIEE
CTVLRGPDGASKGCAFVKYQSNAEAQAAINALHGSRTLPGASSSLVVKFADTEKERGIRR
MQQVASQLGVISPMSLHLGAYNAYTQALVQQQALVAQSAYLSPVATVAAVQMQQLAALNP
SSIIATPIASITPSSGASTPPAIAATPVPTLPPIAVNSYSAVPAPPSGQSASETLYTNGV
HQYQAQSPALDPLQQAYTGMQHYTATYPAAYGLVGQPFPHQPTLVAQQTQQPQQLQQREG
PEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQT
AIQAMNGFQIGMKRLKVQLKRPKDANRPY
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtgcccatggactctcccgatcaacaagaacttgttctgcctggcaacagagc
gctcagtgttcagctacttgtaacgcaaggcttttcgaagggacgctttgggaagcgccg
gaccttgtaaaagaagaagaagaagaagaagaagcagagtcgccgctgtccccaatgaag
gagccggacgccatcaagctcttcgtcggccagatccctcgcaatctggaggagaaggac
ctcaagcctatcttcgagcagtttggcaagatctacgaactgactgtgatcaaggacaag
tacacgggcatgcacaaaggatgcgcgttcttgacgtactgtgccagagagtccgcactg
aaagcccaaaatgcgttacacgagcagaagacattgccagggatgaaccgacccattcag
gtgaagccagcagacagcgagggccgtggagacaggaagctgtttgtgggaatgctgggg
aagcagcagtcggacaccgacgtgagaaagatgttcgagcctttcggcagtatagaggag
tgtactgtgctcagaggaccagacggagccagcaaaggttgtgcgtttgtgaaataccag
agcaacgcagaggcccaagcggccattaacgctcttcatggcagccgcactctgccggga
gcctcttccagtcttgtggtgaagtttgcagacacagagaaggagcggggcatcaggcgc
atgcagcaggttgcctctcagctgggcgtcatcagccccatgagcctccacctgggggcc
tacaacgcttacacacaggctctggtccagcaacaggctttggtggctcagtcggcctat
ctgtctcccgtggcaacggttgctgcggtgcagatgcagcagttggctgctcttaaccca
agcagcatcatagcgacacccatcgcgtcaatcaccccatcctcaggtgcgagcacacct
cctgctattgctgccacaccagtgcctactcttccaccaattgcagtcaacagttactcg
gccgttcctgccccacccagcgggcaatcagcctctgaaacactgtacaccaacggcgtc
caccaatatcaagctcagagccctgccttggatcctcttcagcaggcgtacactggaatg
cagcattacactgccacatatcctgctgcgtatggtttggttggtcagccgttcccacat
cagcccacgctagttgctcagcaaacccaacagcctcagcagctgcagcagcgagaaggt
ccagagggatgtaatatcttcatctatcacctgccacaggagttcaccgactctgagatg
ctgcagatgtttctgcccttcggcaacgtcatctcagccaaggttttcgtcgaccgcgca
accaatcagagcaaatgcttcggttttgtaagcttcgacaaccccgccagcgctcagact
gccatccaggccatgaatggatttcagattggcatgaaaagactgaaagtgcagctgaaa
aggcccaaagatgccaaccgcccatactaa
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