Ictalurus punctatus (channel catfish): 108272744
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Entry
108272744 CDS
T04658
Name
(RefSeq) transcription factor 20
KO
K24769
transcription factor 20
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108272744
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108272744
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
108272744
NCBI-ProteinID:
XP_017336920
Ensembl:
ENSIPUG00000023827
UniProt:
A0A2D0S3X2
LinkDB
All DBs
Position
12:complement(32878588..32893673)
Genome browser
AA seq
2379 aa
AA seq
DB search
MQNFSNSPATLPPGFPSRGGNLVGSPYPPHISDPQISPRTIEDYAAMQQSQSILQSHGQH
PHLRGQQHPGQASHIHGYGSRRGAGEIPQTTGSSSNTYRKESMDYFFSMSGRDRNRRGGG
GFGAGFGYSNMEYQYRHVSGSGPSSGMMSPYPMDYSTSAATGSGSGNSNSSGSGSFSPTQ
QFSMAQNASMQPVSGAEMHQRQHSQKYPSHQGLHPGHRAYPLSGHRIPSHFGHYPPLNVP
TPSVGMYNSPPQRYEMSSGNMDSKINSPTPNTTPGSVASNNSGHQENAGQSYPSSNHPPY
SPQSHPVPKHASRRTAQHSLGAAFDAPLKMQHAPPGLAHPKNHQSSVSLSPAAPHHAQDI
SKSPMQSQNQQTQMNQNFSPISNPSPVPSAVHSPSCSSSSSPLMGVSEGLGSSASLHSSL
LNPRSSHSHIRAQHTMSQLSPTPSSNSSISSCGSVVSSAGNQNRMGVGLRGGQREETSSL
YPQDKLSQDPGLNSLNALTSQVANLPNTVQHTMLTDTVLSQKKRRESTHQPLLQQTVSNQ
QKHRNASAAGRSTANEESGNVLASEPEEASKNHSDHSEHEKARQPDGFSTESKPANYYSV
SPNLTQSQTEQSRPGRHLQKDDRVTEGSVKQSFSQVAKPFSQIKAPETQTPSSSSPPCVP
PEPSPNASSCAPAPSASSSAASSPTHSVQSNCVIEPDLGHNDEKTGLNEKKTSDIMKVEK
HTVKHEELSHQELDNGKNTQTLASVKVEQSGPVEQNENEKDDERNNSQHFLSRTLNTPEQ
SNSGVGVIVSARSEQNPEGLKQTEVTSHHGTSSDMGKLNYTEEKHSVNMFRDSGSHNGDG
EIGIETFPAHYDVSPKTEFGQNVSSNHCQVGSYKYCNPEMPYNACMGAKIKVRAGPGSGI
SANRYQDYHQSQSNFAYVSRKDVGVLGVMGKSGVGSRGQDNNLQLQQPYPSLLQEVLQGY
HLDRRYCRPEQTSGSHHQPQNMSQHHYHTRLPYRMTENVRPHGMDQSAMGGASIHQQMVA
GKHHSQNQGLDHEVGLGLLHPSWDSEAQRPKGDQGISSEKGTITMSPSHSTHIQQSSDPS
IVTPPKHINLADYSLPHRKTPSLATPPSAVQQLLLQESDQELSRNSESINQTQSQMSLCS
ERRSVICDVSPSRRTTSERERSHCGISGSSVIQHPHSSSVLSEQGCTKEDVKDKEHELEK
ASKVNAKELGKQLGDGQSVILPKEEPSKSLHAHMELNSDLHKQGGGKGIIDPSSNALYHS
KISSNPLSSPPRCKPYSQAVDGSSAGFPAYGFNDAADGTKMNAHHPSANSFHSLSSPGHV
PPSVNKLQAYSHNVPLQHTHGISERFDWSTSSNRHKDVSIHHNSTQNPDQKLLRQHSYPG
SHYDMKIWESYTEREGTGNQQLHSLAPSHKSVGSVPASGPKPLEADVSRGITEDSAKSYH
SPAAAGLGSSGGSGSSVITPSVPQGHRQNKTGGSAETNPLMMRRRVRSFISPIPAKRQHQ
DFSGNRGVSSHHSPVAHSESRPVNDLSDSSSVDSRPKLASPNTPFQTPCANSPPQAKTKF
LPPRKGRGLKLEAIVQKITPNKKASYSNIHADADYSDVSRYSSDIPDPEIGTPFSNAPHR
ESGCLPYLDEAHALDDLLPYRAEDAYSCDSQVLKQGVTASTGTTLRNLPTDFDFGLGTAG
SSGPGPDEGDKDEFTLLGPLPPPPPLPRPVQGSPPPSSSALSDIQQFTNTYQQLETRRGE
QSAANLLRQKLQETGMGFDDYPGGDFYGATPPHGQSPGHHLLSRPPHELSSPRTTASDSK
LQESFVPKGYFPSGKKKGRPVGSVNKQKRVQVQVPNATSNVTSAPHTPPAGSLPATPQPA
PNSSMAGEAVIISTLPEEKPCPALDLAAQNQPVKVEVEGDGDDNQPEMDMKPIKHRQRKG
KEVTEGTGSKSRQWRKSRGMSSKEELDPQTVGVGNAGTLQDTRKNIFSPYVHVERKITEI
GAVCTVVNSEDEKSKGGGKNGASGVDGISNVSLISQMVRKEREIERVQEKGIDEPNDSVM
QSGKSLPTSGYVLPGPVMAETGHTGRLLCCLCQKWANFKNLGDLYGPFYPADYAAKFPKN
QPQVRQILSNTGAANPGSNPSSVSTELTVPDIQSVYLPDISSADTSCSVSQTTNPVSPAV
SENLPCLSTTTKAPEQNWNLIPEGALTTLDPPELENELTQRRQQKAEDVQQRPQHRKLTS
HPRFKRRHKSSEDLPRTIPINSKASLPFQPPPPSLDSLGPLAQLAQLPVVPLDPKELWVH
ESCIIWTSGVYLVNGRLYGLQEALDGARETSCSHCEMAGSTLGCYSKGCTLRYHYLCAVE
ADCCLNEDNFSLRCPKHKFPQTSRPAKPAAAHQEQSERG
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacttttccaacagtcctgccactctgcctccaggatttcccagcaggggtgga
aacttggttggttccccatatccaccccacatatcagatcctcagatatctccaaggact
attgaagattacgctgccatgcagcaatcgcaatctattctccaaagtcatgggcagcac
ccacacctacgtgggcagcagcatcctggacaagcatcccatatccatggctatggatcc
aggcgaggtgctggagagataccacagactactggaagcagtagcaacacctaccgaaag
gaaagcatggattattttttttcaatgagtggccgagacaggaacagaagaggaggaggg
ggttttggagcagggtttgggtactcaaacatggaataccaatacaggcatgtttctggg
tctgggccatcctctggcatgatgtctccttaccccatggactacagcaccagtgctgct
actggtagtggcagtggaaatagtaatagcagtggtagtggttcattttcacccacacag
cagtttagtatggcccagaatgcatcaatgcagccagtttcaggtgctgaaatgcaccag
cgtcagcatagccaaaaatatccctcacaccaagggttacacccaggccatcgggcctat
cctctgtctggacacagaataccatctcactttgggcattaccctcctcttaatgtgccc
acaccatcagttggaatgtacaactctccaccccaacggtatgagatgagcagtggaaac
atggactccaaaatcaactcgcccactcccaacaccactccaggttctgtagcttcaaac
aactctgggcaccaagagaatgcaggacagagctacccctcttctaaccatccaccttat
tcaccacagtcccatcctgttcccaaacatgcctctcgccgcactgctcagcatagtctt
ggagcagcctttgatgccccactgaagatgcagcatgcacctcctggcctcgcacaccct
aaaaaccatcagtcctctgtgtctttaagtcctgctgcaccacaccatgctcaggacatt
tccaaatctcccatgcagtcccaaaaccagcagactcagatgaatcaaaatttcagccca
atttctaatccatctcctgttccatctgctgtccactctccaagctgcagctcctcctcc
tccccactgatgggtgtttcagaagggctgggtagttctgcatcattgcactcctcactt
ttaaatccccgcagcagtcacagccatattagagcccaacataccatgtcacagcttagc
ccaactcctagttctaatagcagtattagtagttgtggtagcgtagtgagctctgctggt
aatcaaaatcgaatgggagtgggtctgcggggtggacaacgggaagaaacttcatccttg
tacccacaggacaagctctcgcaagaccctgggctaaatagtctaaatgccctcacatcc
caagtggctaatttgcccaatacagtacaacatacaatgttaacagacactgtgctctct
cagaagaaaagaagagagagtacacatcagcctctcctgcagcagacagttagcaatcag
cagaaacatagaaatgctagtgctgctggtcgaagcacagcaaatgaggaaagtggaaat
gttttggcatctgagccagaggaggcaagtaagaatcacagtgaccattcagaacatgaa
aaagcgagacaaccagatgggtttagcactgaatctaaacctgctaactactactcagta
tctccaaatctgacacaaagtcagacagaacaaagtcgtcctggtcggcatctacaaaag
gatgacagagtcacagaggggtcagtcaaacaatcatttagtcaggttgcaaaacctttt
tcacagattaaggcaccagaaacccaaactccgtcatcttcatctccaccctgtgttcct
ccagaaccaagcccaaatgcatcttcttgtgcacctgctccctcagcctcatcatctgct
gcatcctctcctactcattctgtacaatcaaattgtgtaattgaacctgatcttggtcac
aatgatgaaaaaactggactgaacgagaaaaagacttcagatattatgaaagtcgaaaaa
cacacagttaaacacgaagagctttctcatcaagaactggacaatggaaaaaatactcag
accttggccagtgtaaaggtggaacaatcaggcccagttgaacaaaatgagaatgagaag
gatgatgagagaaacaattcacagcattttctcagtagaactttaaacactccagaacag
tctaattctggggttggcgttattgtttctgcacggtctgaacaaaatcctgagggactt
aagcaaacggaggttacatctcaccatggcacttcatcggacatgggcaagctcaactat
actgaggagaaacattccgtaaacatgtttagggattctgggagtcacaacggagatggg
gaaattggtatcgaaacattcccagcacactatgatgtttctcctaagactgaatttggg
caaaatgtgtcctcaaatcactgtcaagttggttcttataaatattgcaatcctgaaatg
ccatacaatgcttgcatgggtgcaaaaatcaaggtacgggctggaccagggagtggaata
agtgcaaacagataccaagactaccatcagtcacagtctaactttgcttatgtgtctaga
aaggatgttggtgttttaggagtaatgggaaaaagtggcgtaggatcaagaggtcaggat
aataatttgcagttgcagcaaccatatcccagtcttttacaagaggtcctccaaggctat
catttagatcggcgctattgccgtcccgaacaaacatctggtagtcatcatcaacctcaa
aatatgtcccagcatcattatcatactagactcccctaccgaatgaccgaaaacgtgagg
cctcatggaatggaccagtcagcaatgggtggtgccagtattcatcaacaaatggtcgca
ggaaagcatcactctcaaaatcagggactagaccatgaggtgggccttggtcttcttcat
ccctcttgggattctgaagcacaaaggcctaagggggatcaaggaatctcatcagagaag
ggcacaataactatgtctcctagccattccacccatatacagcaatcctcggatccttca
atagtaactccccctaagcacattaacttggcagactattccttgccccacagaaaaacc
ccaagcctggctactccaccctctgctgtccagcagttgcttttacaagaatctgaccaa
gaattatctcgtaattcagaatccataaatcaaacccaatctcagatgtccttgtgttca
gaaaggcgctcagtcatctgtgatgtatctccatcacgacggaccacttcagaaagagaa
agaagtcactgtgggatatctggatcctcagtcattcaacacccccactcatcctctgta
ttaagtgagcaagggtgcactaaggaggatgtaaaagataaagagcatgaattggaaaaa
gcttctaaggtaaatgccaaagaacttggaaaacaacttggagatggacagagtgtgatt
ttacccaaggaagaacctagtaagtccttgcatgcgcacatggaacttaattctgacttg
cataaacagggtggtggaaaagggattattgatccctccagcaatgccttatatcactcc
aaaatttcctctaatcccctttcatcaccacccagatgcaaaccttattcacaggctgta
gatggatcctctgcaggttttcctgcttatggttttaatgatgcagctgatggaaccaaa
atgaacgcacaccatccatctgcaaattcattccattcattgtcatctccaggtcatgtc
ccaccttcagttaacaaattacaagcatattctcacaatgttcctcttcagcacacacat
ggcatcagtgaacgatttgactggtcaaccagcagtaatagacataaggatgtgtccatc
catcacaactctacccaaaaccctgaccagaagttattaagacaacactcataccctggc
tctcactatgatatgaaaatttgggagtcctatactgaaagagaaggaactggaaaccaa
cagctacactctttggctccttctcacaagtctgttggatctgtaccagccagtggtccc
aagcccctggaggcagatgtctccagagggattacagaagattcagcaaagtcatatcat
tcacctgcagctgctggtttaggcagttcaggtggttcaggcagcagtgttattacacca
agtgttccccaaggacatcgacagaacaaaactggggggtcagcagagactaacccatta
atgatgaggaggagagttcgctcattcatttctccaattcctgccaaaaggcagcatcag
gatttttctggcaacagaggtgtgtcatctcatcactctcctgtagcccattcagaatct
aggcccgtaaatgatctaagtgattcaagcagtgtagactctcgtccaaaactagcttct
cccaatacaccatttcaaactccatgtgctaattcacccccacaggcaaaaacaaagttt
ctaccgccaagaaagggacggggattaaaactggaagctatagttcaaaaaatcactcca
aataaaaaagccagttacagtaatatccacgcagatgctgattattcagatgtatcacgt
tacagttctgatatacctgacccagaaattggcacacccttctctaatgcacctcacaga
gaaagtggttgtctaccttaccttgatgaagctcacgccttggatgatctcttgccctat
agagcagaagatgcatattcttgtgattctcaagttcttaaacagggtgtgactgcgtct
actggtactactctgagaaatttgccaacagactttgactttgggttaggcactgctgga
tcttcagggcctgggcctgacgaaggtgataaggatgagtttacactattaggacccctt
cccccaccacctccattgcctcgtcctgttcaaggttctcctcctccatcctcatctgct
ttgtccgatatacaacaatttactaacacttaccagcagctggagacaagaagaggtgag
cagtctgctgctaacctactgaggcagaaacttcaggagactggcatgggttttgatgat
tatcctggaggggatttctatggagctaccccaccccatggccaaagtccaggacaccac
ctgctctccagacctccacatgagttatcctcaccaagaacaacagcatcagactccaaa
ctacaagaaagctttgtccccaaaggttattttccttcaggaaaaaagaagggacgacca
gtaggaagtgtaaataaacaaaaacgtgtacaagtccaagtaccgaatgccacttccaat
gtaacgtcagctcctcatactcctcctgctggttctcttcctgctactcctcaacctgca
ccaaattccagcatggcaggagaagcagtcattatatcaaccctacctgaagagaaacct
tgtcccgctctggatcttgctgcacagaatcaaccagtaaaggtggaggtggagggcgac
ggtgatgacaaccagcctgagatggatatgaaaccaataaaacacaggcagagaaaggga
aaggaggtgactgaaggaaccggctcaaaaagcagacagtggaggaaaagtagaggaatg
tcctctaaggaagagctggatcctcagactgttggtgtgggaaatgcagggactttgcaa
gacactaggaaaaacattttctcaccatatgtacatgttgaaaggaagataactgaaatt
ggagctgtgtgtacagtggtcaattccgaagatgagaaatcaaaaggaggaggcaaaaat
ggtgcttctggggttgatggcatctcaaatgtttctctgatatctcagatggtcagaaaa
gagagggaaattgagagggtgcaggaaaaagggattgatgagccgaatgattccgtcatg
cagtcaggaaagtctcttcccacatctggatacgtcctcccaggccctgtgatggctgag
actgggcacactggtcgtttgttgtgttgcctttgccagaaatgggcaaatttcaagaat
cttggggatctctatggtcctttctacccagccgattatgctgccaaattcccgaagaac
caaccccaagttcgacagatcttgtcaaacactggggcagccaacccagggtcaaatcca
tcttctgtatcaacagaattaactgtcccagacattcagtctgtatatcttccagacatc
agttcagctgacaccagttgttctgtaagtcaaaccacaaacccggtgtcccctgcagtg
agtgaaaacctgccgtgtctcagtaccaccaccaaggcaccagagcaaaactggaatctg
attccagaaggggcgctcactacgttagacccacctgaactagagaacgagctgacccag
agacgacagcagaaagcagaggatgtacagcaacgaccacagcatcgaaagctgacttcc
catccacgtttcaagaggagacacaaatctagtgaggacttaccccgcacgattccaatt
aacagcaaagcttcactgcctttccagcctccaccacccagccttgattccttgggacct
ttggctcagctcgctcagctcccggtggtgcccttagatccgaaggagctttgggtccat
gaaagctgcatcatctggactagtggtgtttacctggtcaacggaagattgtatggcctc
caggaggcgctagatggtgccagagaaaccagctgctctcattgtgaaatggctggctcc
actctgggttgctatagtaaaggctgcacactgaggtatcattacctgtgtgctgtggag
gcagactgctgtctaaatgaagataatttctccttgaggtgtccaaagcacaagtttcca
caaaccagtaggccagccaaacctgcagctgcacaccaggagcagtcagaaagaggctga
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integrated database retrieval system