Ictalurus punctatus (channel catfish): 108272767
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Entry
108272767 CDS
T04658
Symbol
ago3b
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108272767 (ago3b)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108272767 (ago3b)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108272767 (ago3b)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108272767 (ago3b)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108272767 (ago3b)
microRNA pathway
RISC loading complex
108272767 (ago3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
108272767
NCBI-ProteinID:
XP_017336965
Ensembl:
ENSIPUG00000008548
UniProt:
A0A2D0S419
LinkDB
All DBs
Position
12:complement(19228872..19254702)
Genome browser
AA seq
867 aa
AA seq
DB search
MEIGTTGAVGAAPLFSVPRRPGYGTMGKPIKLLANCFQVDIPKMDVYLYDVDIKPERCPR
RVNREVVDSMVQHFKVTIFGDRKPVYDGKKSLYTAQPLPVATGGVDLDVTLPGEGGKDRP
FKVSIKFVSLVSWHMLHEVLTGRSIPEPLELDKPISTNPVHAVDVVLRHLPSMRYTPVGR
SFFSSPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYEADPFVQEFQFRVRDEMAEVTGRVLPAPMLQ
YGGRVSSEHFLNRTVATPSHGVWDMRGKQFHTGVEIKIWAIACFATQRQCREEILKSFTD
QLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLIIVILPGKTPVYAEV
KRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVI
FLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQDLASMVRELLIQ
FYKSTRYKPTRLIFYRDGVSEGQFRQVLYYELLAIREACISLEREYQPGITYIVVQKRHH
TRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDN
CFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSG
QSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggcactacaggagccgttggggctgcgcccctgttctccgtaccgcgcaga
cctggctatggcaccatgggcaagcccatcaagctgctggccaactgttttcaggtggac
atcccaaagatggatgtctacctgtatgacgtggacatcaagccagagagatgtccacgc
cgtgtcaacagggaggttgtggactccatggtgcagcattttaaagtgaccatctttgga
gatagaaagccggtctatgacggcaagaagagcctgtacacagcacagccgctaccagtt
gccacaggaggagtagacctagatgtgaccttgcctggagaaggaggtaaggatcggccc
tttaaagtctcgatcaagtttgtgtcgctggtcagctggcacatgctgcatgaggtgctg
actgggcggagtattcccgagcctctggagttggacaagccaatcagcaccaaccctgtg
cacgctgtagacgtggtgctgcgccacctgccctccatgaggtacacaccagtaggccgg
tccttcttctcttctcctgaaggttatgatcatccactgggtgggggcagggaggtgtgg
tttggcttccaccaatcagtgaggccggctatgtggaagatgatgctgaacatagacgtg
tctgctacggcgttctacaaagcccagccggtgatccagtttatgtgtgaggttctggac
atccataacattgatgagcagccacgccctttgacagactcgcacagggtaaaattcacc
aaagaaatcaaaggtctgaaggtggaggtaacacactgcggcaccatgaggcgaaagtac
agggtgtgtaatgtcacccgccggcctgccagccaccaaacgtttccgctgcaactggag
aacggacagactgtggagagaacagtggcgcagtacttccgtgagaaatacaacctgcag
ctcaaatatccccacttgccctgcctgcaggtgggccaggagcagaaacacacatatctg
cccctagaggtgtgtaatatcgtagctgggcagcgctgcattaagaaactgacagataac
caaacttccaccatgattaaagccacagctcgatcagcaccggacaggcaggaggagatc
agccgactggtgcgcagtgcaaactatgaggctgacccatttgttcaggagttccagttc
cgcgtgagggatgagatggccgaggtgaccggccgcgtattgcctgcccccatgctgcag
tacggcggcagggtgagctctgaacacttcctgaatcgcactgtggccactccaagccat
ggtgtatgggatatgagagggaagcagttccacactggtgtagaaattaaaatctgggcc
atcgcctgctttgccacccagagacagtgccgagaggaaatcctcaaaagctttaccgat
cagctgcgtaagatttcaaaagatgccgggatgcctattcagggccagccgtgcttctgc
aagtacgctcagggagcagacagtgtagagcctatgttcagacacttaaaaaacacttat
gctggcctgcagctcatcatcgttatcctgcctggaaaaacgcctgtttatgcggaggtg
aagcgtgttggagacactcttcttggaatggccactcagtgtgtgcaggtgaagaacgtg
gtgaagacgtcaccacagacgctctccaacctctgcctcaagatcaacgtcaagctaggt
ggcatcaacaacatcctggttcctcatcaacgtccgtccgtcttccagcagccagtcatt
ttcctaggtgctgatgtcactcatccacctgcaggagatggcaagaagccctccatcgct
gctgtggtgggcagcatggacgcccacccgagccgctactgtgccacggtgcgtgtgcag
aggcccaggcaggaggtcatccaggacctggcctccatggtccgagagctgctcatccag
ttctacaaatccacacgctacaaacccacacgtctcatcttttacagagacggagtgtcc
gagggacagttccgacaggtgctgtattatgagctgctggccattcgggaagcctgtata
agtctggagagagagtaccaaccaggcatcacgtatatcgttgtgcaaaagcgccaccac
acacgccttttctgcgctgaccgtaacgagagggtcggacggagtgggaacattcctgcc
ggcaccacagtcgacacagacatcacccacccctacgagtttgacttttacctctgcagt
catgctggaatacagggtacgagccggccctcacactaccatgtgctgtgggatgataac
tgcttcacagccgacgagttccagctgctcacctaccagctgtgtcacacgtatgtacgc
tgcacacgctccgtctccatcccagcgcctgcctactatgcccacctagtggccttccgt
gctcgttaccacctggtcgacaaggagcatgacagtgcggagggcagtcatgtgtcagga
cagagtaatggtcgtgacccccaagctttggccaaagctgtgcagattcaccacgacact
ctgaggaccatgtactttgcctag
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