Ictalurus punctatus (channel catfish): 108272783
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Entry
108272783 CDS
T04658
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108272783
03036 Chromosome and associated proteins [BR:
ipu03036
]
108272783
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
108272783
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Topoisomerases
108272783
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
108272783
Centrosome formation proteins
Centriole proteins
108272783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
108272783
NCBI-ProteinID:
XP_017337000
Ensembl:
ENSIPUG00000012089
UniProt:
W5USP5
LinkDB
All DBs
Position
12:complement(22480790..22512161)
Genome browser
AA seq
1622 aa
AA seq
DB search
MSNSAAGSGGLNWVTLFDKNNGTKREEANGEGGKSELPRKESSKKMSVERVYQKKTQLEH
ILLRPDTYIGSVEPVTQQMWVFDDEIGMNLREITYVPGLYKIFDEILVNAADNKQRDKNM
NSIKITIDPESNTISIWNNGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDEEKKVTGGR
NGYGAKLCNIFSTKFTVETACREYKHSFKQTWQNNMTKTSDAKIKHFDGDDFTCVTFQPD
LAKFKMDKLDKDIVALLTRRAYDVAGSCKGVKVILNGKKLPVNGFRSYVDLYVKDKLDET
GVALKVVNEAVNERWEVCLTMSEKGFQQISFVNSIATTKGGRHIDYVVDQIVSKLIEVVK
KKNKAGVSVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKSFGSKCALSEKFIRAA
SNCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSSECTLILTEG
DSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKIVGLQYKKSY
DDAESLKSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEEFITPIVKATK
NKQELSFYSIPEFEEWKKQTENYKTWHIKYYKGLGTSTSKEAKEYFSDMDRHRIMFKYGG
TEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQFLYGTATRHLSYNDFINKE
LILFSNSDNERSIPSLVDGLKPGQRKVLFTCVKRNDKREVKVAQLAGSVAEMSAYHHGEQ
ALMMTIVNLAQNFVGSNNINILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPPVD
SNLLKFLYDDNQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDPREIVNNINRMLDH
QDPLPMLPSYKNFKGVIHELGQNQYVVSGEVSVLDKNTIEITELPIRTWTQAYKESVLEP
MLQGTEKTPVLISDYKEYHTDTTVKFVVRMTEEKLAQAEAAGLHKVFKLQSPLTCNSMVL
FDHMGCLKRYESVNDILKEFFELRLHYYKLRKDWLVGSLGAESAKLSNQARFVLEKIEGK
ISIENKTKRDLIRMLVQRGYESDPVAAWTKAQEKALEDENHDGNTSDSSVDSGSSSGPNF
NYILNMPLWCLTKEKVDELLKQRDVKKAELNELQRKSPDDLWRGDLAVFIEELDRVEEQE
RENNSMGKAVKLVKGKVGKPKVKKIQLEETLPSPFGRRVEPQITLAMKADASKKMTKRKK
GDAEMSVKLEFDDDGMMDTNGAAGDNSTISPSGQPNPGAKPKAPRVKKEKKEPGTTRQRK
TPGAAKSTPKKAKKRNPWSDDDDKSDSDLDESEQPVIPRDTTSRRASAAKAKYTFDFSEE
EEDADEDQDNEPAASPVHSYKENFSTAQNNNNNNNDEDDDEDEDDDDIFPPKPAITSSAS
EAVKKKESVFSSSKHAYLEKSSDSEVKSDSEDDRDAAFSSYSSSSAFEKLSPAKKAKKPS
EAAPKPRKPPAKPKKPDTSVWDSDSDTAAKKPPSAPSLKGPGKGRGRKRKQSDSEEDYNP
VKKTGKAPTSRKPKKAASDEDEDEVNSKSFSRLDTARDRSGRAKKEVKYFAESDDDVDDM
FD
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacagtgctgcaggaagcggagggctgaactgggtgaccctttttgataagaac
aatggcaccaagagagaggaggcgaacggcgaaggcgggaagagcgagctgcccaggaaa
gagagctccaagaagatgtctgtggagcgtgtgtaccagaagaaaacgcagctggagcac
atccttctccgcccagacacctacatcggctcagtggagcctgtcactcagcaaatgtgg
gttttcgacgatgagatcggaatgaacttgcgagagatcacttacgtgcctggactgtat
aaaatctttgatgaaattcttgttaacgcagctgacaacaagcagcgagacaagaacatg
aacagcatcaaaatcaccatcgatccggagtctaacaccatctccatatggaacaacggg
aaaggaatccccgtggtggagcacaaagatgaaaagatgtacgtccctgctctgatcttc
ggacacctgctgacctccagcaattacgacgacgaggagaaaaaagtcacaggtggaagg
aatggatacggtgctaagctctgtaacatattcagtaccaagttcaccgtggaaactgcc
tgcagagagtacaaacacagcttcaaacagacgtggcagaacaacatgacaaaaaccagc
gacgcgaaaatcaagcacttcgacggggatgacttcacctgtgtcacgttccagcccgac
ctcgccaaattcaagatggacaaactggacaaggatatcgtggctctgctgacgcgccgg
gcctacgacgtagccggctcatgcaagggcgttaaagtcattctcaacggcaagaagctg
cctgtgaatggcttccgcagttatgtggatctatatgtgaaggataaactggacgagacc
ggtgtggcactgaaggtagtaaacgaggcggtgaacgagcgctgggaggtgtgtctcacc
atgagtgagaaggggttccagcagatcagctttgtcaacagcatcgccactacaaagggt
ggaagacacattgattatgtcgtggaccaaattgtgtcgaaactcatcgaggtggtgaag
aagaagaataaagcaggagtctcagtgaaaccattccaggtcaagaaccacatctgggtg
tttgtgaacgctctgatcgagaacccgaccttcgactctcagactaaagagaacatgact
cttcagaccaaaagctttggctcgaaatgtgctctctctgagaagttcatacgagcggcg
agtaactgtggcatcgtggagagcatcctgaactgggtgaagttcaaggctcagacacag
ctgaataaaaagtgctcttcggtcaagcacagcaagatcaaaggcatccctaaactggat
gatgctaacgatgccggcgggaagcactcatctgagtgcactctgattcttaccgaggga
gactcagccaaatcgctggccgtctccgggctgggcgtaatcggacgagaccgctacgga
gtttttcctctaagaggcaagatcctgaatgtgcgggaagccacgcacaaacagatcatg
gagaatgcagaaatcaacaacatcatcaagatcgtcggtttgcagtacaagaagagctac
gatgacgcggagtcgctgaaatctctacgctatggcaaaatcatgataatgaccgatcag
gatcaagacggctcgcacattaagggcctgctcatcaacttcttccaccataactggccg
tcccttctgaagcacacgttcctggaggagttcatcaccccgatcgtcaaagccactaag
aacaaacaggaactttccttctacagcattccagagttcgaagagtggaagaagcaaacg
gaaaattacaaaacatggcacataaagtactacaaaggtttgggtaccagcacgagcaaa
gaggcaaaggaatacttttccgatatggatagacatcggattatgttcaagtacggaggc
acggaggacgatgctgccattactttggctttcagcaagaagaagacagacgacagaaaa
gagtggctcactaatttcatggaggacaggcggcagaggaggatgcacggtctgcctgag
caattcctgtacggcaccgcaacacgacacttgtcctacaacgacttcatcaacaaagag
ctgattctcttctccaactccgacaacgagagatcgattccgtccctcgtcgatggtctg
aagccgggccagaggaaggtcctgtttacttgtgtgaagaggaacgataagagggaggtt
aaagtggctcagctggctggctcagtagcagagatgtctgcttaccatcacggcgagcaa
gctctaatgatgaccatcgtgaacttggctcagaactttgtcggcagcaacaacatcaac
atcctgcaacccctgggccagttcggcacccgcatcaacggaggcaaagacgcagctagt
cctcgttacattttcaccatgctcagtccactggccaagctgctgttcccacccgtagac
tccaacctgctgaagtttctttacgatgacaaccagaaggtggagccagagtggtacatt
cccataatccccatggtgctggtgaacggagcagagggtatcgggactggctgggcctgc
aagatccccaactacgacccgcgagagatcgtcaacaacatcaaccgcatgcttgaccac
caagatcctttgcctatgcttcccagctataagaacttcaagggagtgatccatgagctg
ggccagaaccagtatgtggtcagcggcgaggtctccgtcctcgacaagaacaccatcgag
atcacagagctcccaattcgcacctggactcaggcctacaaggagtctgtgttggagccc
atgctacagggcacagagaagaccccagtgctcatctccgactataaggagtaccacaca
gacaccacagtgaagtttgtggtgcgcatgacggaggaaaagctggcccaagctgaggca
gcaggcctccacaaagtcttcaagctgcagtctcctctcacctgcaactcaatggtgctg
tttgatcacatgggttgtctgaagcggtacgaatctgtgaacgatatactgaaggagttc
ttcgaactgcgcttgcactattacaaactgaggaaggactggctggtgggcagtctgggt
gccgagtcagcgaaactctccaatcaggcccggtttgtgctggagaagatcgaagggaag
atttcaatcgagaacaagacgaagagggatctgatccggatgctggtgcagagggggtac
gagtctgacccagtggcagcttggaccaaagctcaagagaaggctctggaggacgagaat
cacgacggcaacacgagcgacagctcagtggactccggctcctcgtccggtcctaacttt
aactacatcctcaacatgcctctgtggtgcctgaccaaggagaaggtggacgagctcctc
aaacagagagacgtgaagaaagcagaactgaatgaactgcagagaaaatctccagatgat
ctatggagaggagacctggctgtgtttattgaggagctggacagggtggaggaacaagag
cgagagaacaacagcatgggaaaagcagtgaagctggtcaaaggcaaggtgggcaagccc
aaagtgaagaagatccagctggaggagacactgccatcgcccttcggtcggcgagtagag
ccccagatcacactcgccatgaaagccgacgcctccaagaagatgaccaagaggaagaag
ggcgatgcagaaatgtcagtgaagcttgaattcgatgacgacggcatgatggacacgaac
ggtgcggcaggagacaattcgacgatctcgccatccggccagccgaaccccggagccaag
cccaaagccccgcgtgttaagaaggagaagaaggaacctggcactacaagacagaggaag
actccaggtgcagcgaagagcacacccaagaaggcgaagaagaggaacccctggtcagat
gacgatgataagtctgacagtgacctggacgagagcgagcagcctgttattccacgagac
accacatccaggagagcttcagccgccaaagctaagtacacctttgacttctctgaggag
gaagaggatgctgacgaagaccaagataacgagccggcggcgtcaccggtccactcctac
aaggagaacttcagcaccgcacagaataacaacaacaacaacaacgacgaggacgacgac
gaggacgaggacgacgacgatatattcccccctaaaccagccatcacttcgtctgcctca
gaagccgtgaagaagaaggagagcgttttctcttcgtccaaacatgcctacttggagaag
agcagcgacagtgaagtgaagtctgacagcgaggacgacagggacgcggcgttctcgtcc
tactccagcagctcagcgttcgaaaaactctctcctgctaagaaagctaagaagccttca
gaagcggcgcctaagccacgcaaacctccagccaaacccaagaaacccgacacatccgtg
tgggactcggactcggacacggcagctaagaagcccccatctgctccgtcgctcaaaggc
ccaggtaaaggcagggggaggaagaggaagcagtctgactcggaggaagattacaaccct
gtgaagaagaccggaaaagctccgacaagcagaaagccgaagaaggcggcgtcagacgag
gacgaggacgaagtgaacagtaagagtttcagtcgcttggacacagcccgtgaccgatca
ggacgagccaagaaggaggtcaagtacttcgcagagtctgacgatgacgtagacgatatg
ttcgattag
DBGET
integrated database retrieval system
