Ictalurus punctatus (channel catfish): 108272786
Help
Entry
108272786 CDS
T04658
Name
(RefSeq) zinc finger and BTB domain-containing protein 12 isoform X1
KO
K10499
zinc finger and BTB domain-containing protein 12
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108272786
04121 Ubiquitin system [BR:
ipu04121
]
108272786
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108272786
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108272786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-C2H2_4
zf-H2C2_2
BTB_KLHL33
zf-Di19
zf-C2H2_6
Zn-C2H2_12
UBZ_FAAP20
DUF5810
zf-C2H2_11
zf-C2H2_9
Cas5fv_helical
Rad50_zn_hook
DUF7479
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
108272786
NCBI-ProteinID:
XP_017337004
Ensembl:
ENSIPUG00000016219
UniProt:
A0A2D0S2M0
LinkDB
All DBs
Position
12:26599085..26606620
Genome browser
AA seq
531 aa
AA seq
DB search
MDVVCFRLPGHSDAALRNMNSLREQRHFCDITIMAGGRQMFRGHKVVLAAGSAFLRDQFL
LNPFAELQQVSVLHSSTVIRELLQSCYTGVLQFSAKEIVNYLTAASYLQMEHVVEKCRMA
LSQYLQSKSGISGGVKSEESHAMAAIVSGSTRSLDDTSPPPERALSLQPHSSEEDPQVSG
VEQAAVQQHKDEADLSIERLRASEDEESRNDFSVFEVRIRDEHHDAEDNAGIQEDGGDVF
ALRQAVHPHAEDPSRDEGGAPGSSPRGGVRIWRRRFGEPRGGRGRGFKHRKRYTYRERRP
LGNFQQAWRFPTSEEIMGSFGAGIGQDYMALGEGPMRVDYQPSEGQGDAAGSDGGPGHFS
MDGVNAEDDVGVVSLANNEDDGGEDSVAVVGSTSCVTGSVACEQCGLAFSSVEDLAAHSR
STHLLYVCPCCGKHFSQTSNLNRHMAVHRSAKLHSCPLCHKTFTQKSTLSDHMNMHSGQR
PHVCAFCRICFAHKPALRRHLKEQHGKTTAQNYLEIQRECEEPAIAGGGGV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggtgtgtttccgcctgcctggccacagcgacgccgctctgaggaacatgaac
tcgttgcgggagcagcggcacttctgcgacatcaccatcatggccggaggcaggcagatg
ttccggggtcacaaagtggtgctggctgccggatcggctttcctcagggaccagttttta
ctgaaccccttcgcagagctacagcaggtgtcagtgctgcacagctccacggtgatccgc
gagctgctgcagtcctgctacacgggcgtcctgcagttcagcgccaaagagatcgtaaat
tacttaacggcggccagctacctccaaatggagcacgtggtggagaagtgccgaatggcc
ttgagtcagtacctgcagtctaagagcggcatttcaggaggtgtaaaatcagaggagtcc
catgcgatggcggcgatcgtcagcggaagcactcgttctctggacgatacgtcgcctcct
cctgagcgtgccttgtcgctgcagcctcacagctcggaggaggatccgcaggtctcggga
gtcgagcaggccgctgttcagcagcacaaagatgaggccgatttgtccatagagcggctt
cgagcctcggaggacgaagagagcagaaacgacttcagcgtgttcgaggtgcgcatcagg
gacgagcaccacgacgccgaggacaacgcaggaatccaggaggacggcggagacgtgttc
gccttacgccaggccgtacatccgcacgcagaggatccgagcagggatgaaggtggcgcg
ccaggaagcagcccacgcggtggagtgcgcatctggaggcggagattcggggagcccagg
ggcggccgtgggcggggcttcaagcacaggaagcgatacacctatcgcgaacgaaggcct
ttggggaactttcagcaggcttggcgctttcccacctccgaggagatcatggggagtttc
ggagcggggatcgggcaagactacatggctctcggagagggtccgatgcgggtggattac
cagccgtcggaaggccaaggagacgcggcaggttcggatggcggccctggtcactttagc
atggacggagtcaacgctgaggacgacgtcggagtcgtatcgttggccaataacgaagac
gatggcggtgaggactctgtggcggtcgtgggctccacgtcctgcgtgaccggctcggtg
gcgtgcgagcagtgcggcctggcgttttcttccgtggaagatttagccgcgcactcgcgc
tccacccacctgctgtacgtgtgcccgtgctgcggcaaacacttcagccagaccagcaac
ctgaaccgccacatggccgtccaccgctcggccaagctccacagctgcccgctgtgccac
aagaccttcacgcagaagtccacgctgtccgaccacatgaacatgcacagtggacagcgg
ccgcacgtctgcgccttctgccgcatctgcttcgcccacaaacccgcgctgcggcgccac
ctgaaggagcagcacggcaagaccaccgcgcagaactacctggagatccagagagagtgc
gaggagccggctatagcaggaggaggaggcgtttaa
DBGET
integrated database retrieval system
