KEGG T04658: 108272848

Ictalurus punctatus (channel catfish): 108272848

Entry

108272848         CDS       T04658

Name

(RefSeq) DNA-directed RNA polymerase III subunit RPC8

K03022

DNA-directed RNA polymerase III subunit RPC8

Organism

ipu Ictalurus punctatus (channel catfish)

Pathway

ipu03020

RNA polymerase

ipu04623

Cytosolic DNA-sensing pathway

Brite

KEGG Orthology (KO) [BR:ipu00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108272848
09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    108272848
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ipu03021]
    108272848
Transcription machinery [BR:ipu03021]
Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     108272848

SSDB

Motif

Pfam:

RNA_pol_Rbc25 SHS2_Rpb7-N S1

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

12:complement(29796272..29801924)

AA seq 214 aa
MFVVVEMIDTVRIPPWNFHRQLNDAIAEELNKKLANKVVYNVGLCICLYDITKLEDSYIF
PGDGASHTKVHFRYVVFHPFLDEVMVGKIKYCSQEGVYVSLGFFDDILIPPESLQQPAKF
DEAEQVWVWEYETDEGAHDLYMDQGEDIRFRVVDEFFLDTSPTGPTKEPEAPAQTASAAP
ATATDDGTQKKESPYTLVASISEPGLGLLSWWSG

NT seq 645 nt +upstreamnt +downstreamnt
atgtttgtggtggttgagatgatcgacaccgtacggattcctccgtggaatttccaccgg
cagctgaacgacgccatcgctgaggagctcaacaagaaactggccaacaaggtcgtgtat
aacgtaggcttgtgtatctgcctgtatgacatcactaaactggaggactcgtacatattt
cccggggacggagcctctcatactaaagtgcacttcaggtatgtagtgtttcacccgttt
ctggacgaggtgatggtcgggaagatcaaatactgcagtcaggaaggagtgtatgtcagc
ctcggattcttcgacgacatccttatcccacccgagtccctacagcagcctgctaagttt
gacgaagccgagcaggtgtgggtgtgggagtacgagactgacgaaggcgctcacgacctc
tacatggaccagggcgaggacatccgcttccgggtcgtggacgagttcttcttggataca
tctcccaccgggcccaccaaagaacccgaggcacccgctcaaaccgccagcgcagcgcct
gcaaccgctacggacgacgggacgcagaagaaagagtctccttacacactggtggcttcc
atcagtgagccaggtctgggcttgctgtcatggtggagcggctaa

DBGET integrated database retrieval system