Ictalurus punctatus (channel catfish): 108272901
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Entry
108272901 CDS
T04658
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108272901 (trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108272901 (trim25)
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108272901 (trim25)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108272901 (trim25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-RING_2
zf-B_box
zf-C3HC4_3
zf-RING_5
ANCHR-like_BBOX
zf-C3HC4_2
LMP
zf-Nse
Peptidase_S64
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
108272901
NCBI-ProteinID:
XP_017337224
Ensembl:
ENSIPUG00000022469
UniProt:
A0A2D0S390
LinkDB
All DBs
Position
12:15962548..15979671
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AA seq
702 aa
AA seq
DB search
MAEVTDNVALLSLEDDLTCSICLCPFDEPVSLNCGHSFCRGCLEETWNSASSYYCPHCRA
HYLTKPDLKKNTVLSAVVDTFRAKAGTGAGLDGGPDAGFGAAGVPRSPRYEPKPIMCDMC
SEAKAVKTCLTCITSFCTEHVRPHLENPLFRAHELCEPLADLTERLCPEHGKLMEFYCAR
HERSICSSCLQQSHKECGFSTPNEQRMKIESELRDKLNILDGKTEKNQLVITQMREQQAK
LKEMAVVRKRALEAEYQQIREMLQRDEREALDSLDKDLESGITKLNALMKKFNQNIDKMS
STRAEINNLLAKSHSLDFLQASVEMPSVVSFDPYSPRINLDSKRVIAYHSSIVGLKEQIN
KILREPVDNRISLLKPDLVKPVPGEGETSETQKSERKKCETQKNKIGATGASVNLPNPRE
TGSTPSEDPQTPNSGFQPKGGPGGARRKPQPRDKKENRDHKDHKDHKERKDHKTERRKGP
GKGMNPALSKSMEFLDNLNTRPFVAAPVDMSSATIGAATRSELLKFAATLTFDFRTAHKR
VALSENNTKASVSDEPSPYPDIPPRFTVCSQVLCGQGFSRGRHYWEVKMSSNNFCGLGLA
YASIDRKGPSSRLGRNAQSWCIEWFNIKLSAWHNSSEKVLANPNPSRVGVLLDCDNSTAI
FYNVQDRAYPIHTFVFPFSEAVYPAFWIFSSGSSITLCKLNN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtgacagacaatgtggctttgctgagcctcgaggatgatctgacctgcagc
atctgcttgtgtccttttgacgagccggtgagtctgaactgtggtcacagcttctgccgc
gggtgtctcgaggagacatggaacagtgcaagctcctactactgcccgcactgccgtgca
cactacctcaccaagccagatctgaagaagaacacggtgctcagcgcagtggtcgacact
ttcagggccaaagctggtactggagcagggttagacggaggtccagatgctggcttcggt
gctgccggtgtgccacgctcgccacgttacgagcccaagcccatcatgtgcgacatgtgc
agcgaagccaaggcagtgaaaacgtgtctgacttgtatcacatcgttctgcacagagcac
gtgcgccctcacctggagaacccgctgttccgtgcgcacgagctgtgtgagccgcttgcc
gacctcacggaacggctgtgtcctgagcatgggaagctgatggagttctactgcgcacgc
catgagaggagcatctgcagcagctgtttgcagcagagtcacaaggagtgtggattctcc
actcccaatgaacagcgcatgaagatagagtctgaactgcgggacaagctgaacattctg
gatgggaaaactgaaaagaaccagctggtcataacgcagatgagggagcagcaagctaag
ctcaaggaaatggcggtggtgcgtaagcgcgctctagaggcggagtatcaacagattcgg
gagatgttgcagagggatgagcgagaggccttggacagtctagataaagacctggagagc
ggcatcaccaagctcaacgccctcatgaagaaattcaaccagaatatcgacaagatgagc
tccaccagagctgagatcaacaacctgctggccaaatcccactctctggacttcttacag
gcatctgtggaaatgccctctgtggtgagctttgacccttactccccacgaatcaacctg
gactccaagcgtgtcattgcataccactccagcatcgttggcctgaaggagcagattaat
aaaattctgcgtgagcccgtggacaacaggatttccctcctcaaaccagatttggtaaag
ccggttcctggtgaaggtgaaacgagtgaaacacagaaaagtgaaagaaagaaatgtgaa
acacagaaaaacaaaatcggtgctactggagcttcggttaatctgccaaacccgagggaa
actggttctaccccgagtgaagacccccaaaccccgaactccggatttcagcccaagggt
ggtcctggaggagcgagaaggaaacctcagccgagagacaaaaaggagaaccgagatcac
aaagatcacaaagatcacaaagagcgcaaagatcacaaaacagaaaggagaaaaggtcct
ggcaaaggaatgaatccggcattgtccaagagcatggaatttctggataatctgaataca
agaccttttgttgcagctccagtcgatatgagttcagcaaccatcggcgctgctacgaga
agcgaactgttgaagtttgccgccacgctcacctttgacttccggacagcacataaacga
gtggcgctctctgagaacaacaccaaggcgtccgtatcggacgagccgtctccctatcca
gacatccctcctcgcttcaccgtgtgctcacaggtgctctgcggtcagggcttttctcgt
ggccgccattactgggaggtcaaaatgagcagcaataacttctgcggcttaggtctggca
tatgcctccatcgatcgcaaaggtccttccagccgcctgggccgtaacgcccagtcctgg
tgcatcgagtggtttaacatcaagctttcagcatggcacaacagcagcgagaaggtgctg
gccaacccgaacccgagccgcgtaggcgtcctgctggactgcgataacagtactgctatc
ttctacaacgtacaggaccgtgcgtaccccatccacaccttcgtctttcctttctccgag
gccgtgtatccagcattctggatcttttccagcggctcttctattacgctttgcaaacta
aataattaa
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integrated database retrieval system