KEGG   Ictalurus punctatus (channel catfish): 108272901
Entry
108272901         CDS       T04658                                 
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    108272901 (trim25)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108272901 (trim25)
Enzymes [BR:ipu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108272901 (trim25)
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    108272901 (trim25)
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-RING_2 zf-B_box zf-C3HC4_3 zf-RING_5 ANCHR-like_BBOX zf-C3HC4_2 LMP zf-Nse Peptidase_S64 Allexi_40kDa
Other DBs
NCBI-GeneID: 108272901
NCBI-ProteinID: XP_017337224
Ensembl: ENSIPUG00000022469
UniProt: A0A2D0S390
LinkDB
Position
12:15962548..15979671
AA seq 702 aa
MAEVTDNVALLSLEDDLTCSICLCPFDEPVSLNCGHSFCRGCLEETWNSASSYYCPHCRA
HYLTKPDLKKNTVLSAVVDTFRAKAGTGAGLDGGPDAGFGAAGVPRSPRYEPKPIMCDMC
SEAKAVKTCLTCITSFCTEHVRPHLENPLFRAHELCEPLADLTERLCPEHGKLMEFYCAR
HERSICSSCLQQSHKECGFSTPNEQRMKIESELRDKLNILDGKTEKNQLVITQMREQQAK
LKEMAVVRKRALEAEYQQIREMLQRDEREALDSLDKDLESGITKLNALMKKFNQNIDKMS
STRAEINNLLAKSHSLDFLQASVEMPSVVSFDPYSPRINLDSKRVIAYHSSIVGLKEQIN
KILREPVDNRISLLKPDLVKPVPGEGETSETQKSERKKCETQKNKIGATGASVNLPNPRE
TGSTPSEDPQTPNSGFQPKGGPGGARRKPQPRDKKENRDHKDHKDHKERKDHKTERRKGP
GKGMNPALSKSMEFLDNLNTRPFVAAPVDMSSATIGAATRSELLKFAATLTFDFRTAHKR
VALSENNTKASVSDEPSPYPDIPPRFTVCSQVLCGQGFSRGRHYWEVKMSSNNFCGLGLA
YASIDRKGPSSRLGRNAQSWCIEWFNIKLSAWHNSSEKVLANPNPSRVGVLLDCDNSTAI
FYNVQDRAYPIHTFVFPFSEAVYPAFWIFSSGSSITLCKLNN
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggcagaagtgacagacaatgtggctttgctgagcctcgaggatgatctgacctgcagc
atctgcttgtgtccttttgacgagccggtgagtctgaactgtggtcacagcttctgccgc
gggtgtctcgaggagacatggaacagtgcaagctcctactactgcccgcactgccgtgca
cactacctcaccaagccagatctgaagaagaacacggtgctcagcgcagtggtcgacact
ttcagggccaaagctggtactggagcagggttagacggaggtccagatgctggcttcggt
gctgccggtgtgccacgctcgccacgttacgagcccaagcccatcatgtgcgacatgtgc
agcgaagccaaggcagtgaaaacgtgtctgacttgtatcacatcgttctgcacagagcac
gtgcgccctcacctggagaacccgctgttccgtgcgcacgagctgtgtgagccgcttgcc
gacctcacggaacggctgtgtcctgagcatgggaagctgatggagttctactgcgcacgc
catgagaggagcatctgcagcagctgtttgcagcagagtcacaaggagtgtggattctcc
actcccaatgaacagcgcatgaagatagagtctgaactgcgggacaagctgaacattctg
gatgggaaaactgaaaagaaccagctggtcataacgcagatgagggagcagcaagctaag
ctcaaggaaatggcggtggtgcgtaagcgcgctctagaggcggagtatcaacagattcgg
gagatgttgcagagggatgagcgagaggccttggacagtctagataaagacctggagagc
ggcatcaccaagctcaacgccctcatgaagaaattcaaccagaatatcgacaagatgagc
tccaccagagctgagatcaacaacctgctggccaaatcccactctctggacttcttacag
gcatctgtggaaatgccctctgtggtgagctttgacccttactccccacgaatcaacctg
gactccaagcgtgtcattgcataccactccagcatcgttggcctgaaggagcagattaat
aaaattctgcgtgagcccgtggacaacaggatttccctcctcaaaccagatttggtaaag
ccggttcctggtgaaggtgaaacgagtgaaacacagaaaagtgaaagaaagaaatgtgaa
acacagaaaaacaaaatcggtgctactggagcttcggttaatctgccaaacccgagggaa
actggttctaccccgagtgaagacccccaaaccccgaactccggatttcagcccaagggt
ggtcctggaggagcgagaaggaaacctcagccgagagacaaaaaggagaaccgagatcac
aaagatcacaaagatcacaaagagcgcaaagatcacaaaacagaaaggagaaaaggtcct
ggcaaaggaatgaatccggcattgtccaagagcatggaatttctggataatctgaataca
agaccttttgttgcagctccagtcgatatgagttcagcaaccatcggcgctgctacgaga
agcgaactgttgaagtttgccgccacgctcacctttgacttccggacagcacataaacga
gtggcgctctctgagaacaacaccaaggcgtccgtatcggacgagccgtctccctatcca
gacatccctcctcgcttcaccgtgtgctcacaggtgctctgcggtcagggcttttctcgt
ggccgccattactgggaggtcaaaatgagcagcaataacttctgcggcttaggtctggca
tatgcctccatcgatcgcaaaggtccttccagccgcctgggccgtaacgcccagtcctgg
tgcatcgagtggtttaacatcaagctttcagcatggcacaacagcagcgagaaggtgctg
gccaacccgaacccgagccgcgtaggcgtcctgctggactgcgataacagtactgctatc
ttctacaacgtacaggaccgtgcgtaccccatccacaccttcgtctttcctttctccgag
gccgtgtatccagcattctggatcttttccagcggctcttctattacgctttgcaaacta
aataattaa

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