Ictalurus punctatus (channel catfish): 108272917 Help Entry 108272917         CDS       T04658                                  Name (RefSeq) collagen alpha-2(IX) chain   KO K08131   collagen type IX alpha Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu04510   Focal adhesion ipu04512   ECM-receptor interaction ipu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ipu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108272917  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     108272917   09142 Cell motility    04820 Cytoskeleton in muscle cells     108272917  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:ipu00535]     108272917 Proteoglycans [BR:ipu00535]  Extracellular matrix (ECM) proteoglycans   Others    108272917 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  108272917 NCBI-ProteinID:  XP_017337268 Ensembl:  ENSIPUG00000013295 UniProt:  A0A2D0S3D5 LinkDB All DBs Position 12:complement(23953533..23982665) Genome browser AA seq 692 aa AA seqDB search MDRDFTILQIAVLLQVLCLAVAQVSGPPAGPPGPRGPPGPSGTPGADGIDGEKGPPGPPG PPGQKGEAGQPGPDGPPGDDGIDGLIGGKGERGPIGNPGPKGLPGPTGPPGPPGPGLLGL SGPPGQIGFPGEIGLPGPKGVIGLPGPPGLPGPSGKPGPPGKFLGLEEGSADFQCPTNCP PGPKGPQGLQGMKGHKGRAGILGAPGSIGKTGTKGDVGISGEQGIPGPPGPQGLRGYPGM VGRKGEMGPQGYKGILGPIGLPGTPGKEGPRGPPGDAGDKGDMGDQGIRGLQGAVGKKGE NGVPGIDGKDGNPGIPGIKGAPGQNGRPGPPGHQGAAGLPGSPGTNGGVGAKGEPGPRGL VGMPGAPGPQGEPGPPGEVGMVGVPGPKGDRGERGPVGPLGIVGKPGNKGERGPIGLPGP QGLTGTKGDKGFQGKVGPKGDFGDPGVEGLAGEKGEKGLSGEPGPKGQQGVRGDQGYNGP TGDPGKPGEPGPPGLPGPRGIHGVRGAPGMPGIQGTAGHDASDEHIIEVVLKMLQERLAA LAVSSNRGPLGGAGVMGPPGPPGPPGSPGPRGAIGNTGTRGIPGMIGAAGQIGNTGLKGR RGAKGERGDPGRPHPGLHGPPGLPGPPGLDGVARDGKPGERGPQGVAGQPGHPGKAGPPG LPGFCEMAACLAASAYTSPRLQEAGTVKGPST NT seq 2079 nt NT seq  +upstreamnt  +downstreamnt atggatcgggactttaccatcctccaaattgctgtgctcctgcaggtgttgtgtctggct gtggctcaagtgagtggcccacctgctggacctccgggccctcgcggtccccccggccct tcaggtacccccggagccgacggcattgatggtgaaaaagggcctcctgggcctcctgga cctcctggtcagaagggagaagcaggccagccgggcccagacggtcctcctggggatgat ggaattgatggtttgattggaggaaagggtgaaagaggtcccattggaaatcctggacca aagggactaccaggacctactggtccaccaggaccacctggacctgggcttcttggactt tctgggccaccaggtcagatcggttttcccggggaaattggactccctggacccaaggga gttataggacttcctggaccaccaggtttgccaggaccttcagggaaacctgggccgcct gggaagttcttgggtttagaagaaggcagcgctgatttccagtgcccaactaactgtcca cctgggcctaaaggtcctcaaggccttcagggcatgaagggtcacaaaggtcgtgctggt atactgggagctccaggaagtattggaaagacgggcacaaagggagatgttgggatctct ggtgagcaaggaataccaggccctccaggtccacaggggctgagaggctatccaggaatg gttgggcgtaaaggagagatgggccctcaaggttacaaaggtattcttggacccattgga cttcctgggacccctggtaaagagggaccccgaggtcctcctggagatgctggggacaaa ggtgatatgggtgaccaaggcatcagaggactacagggagcagtgggaaagaagggagag aatggtgtcccaggcattgatggcaaagatggtaaccctggcattccaggaataaagggt gctccaggccagaatggaagacctggtccacctggacaccagggggcagcaggtttgcct ggaagccctgggaccaacggtggtgtgggtgctaagggtgagccaggacccagggggttg gtaggaatgcctggtgctccaggtcctcagggtgagccagggccaccaggtgaagttggt atggtaggagttcctgggccaaagggtgacaggggtgagagaggacctgttggacctctg ggaatagttggcaaacctggaaataaaggagaaagagggccaatcggtcttccaggacct caaggtcttactggaaccaaaggcgacaagggattccaaggcaaagtgggaccaaaggga gactttggcgatccaggggtagagggattggctggagaaaagggagaaaagggactgtct ggtgaacccggccccaaaggacagcaaggagtgaggggtgatcaaggatacaatggccct acaggcgatcccggaaaacctggagaaccgggtccgccaggtcttcctggacctcgaggc atccatggagtgagaggtgcgccaggcatgccaggaatacagggaacagctggtcatgat gcctcagatgaacacattatcgaggtggtcttgaagatgctacaggaaagattagcagct ttagcagtgagctctaataggggaccactaggaggagctggagtaatgggaccaccaggt cctccaggacctcccggatctccaggtcctcggggagccattggcaatactggtacccga gggatcccaggcatgattggagctgcaggccaaatcgggaatactggcctgaaaggaaga agaggtgcaaagggagagagaggagaccctggtcgccctcatccaggtctacatgggcca cctggcctaccaggtcctcctggtctggatggagttgcacgggatggcaagccgggagaa agaggtccacagggtgtagcgggtcaacccggtcatcccggaaaagccggtcctcctggc ctccctggcttctgtgaaatggcagcatgcctggcagcgtcggcttatacttccccacga ctccaggaagctggcacagtcaagggaccgtccacttag

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