Ictalurus punctatus (channel catfish): 108272931
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Entry
108272931 CDS
T04658
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108272931
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
108272931
Peptidases and inhibitors [BR:
ipu01002
]
Serine peptidases
Family S54: Rhomboid family
108272931
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
DUF5580_M
EF-hand_11
EF-hand_9
AIF-1
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
108272931
NCBI-ProteinID:
XP_017337287
Ensembl:
ENSIPUG00000022739
UniProt:
A0A2D0S3F6
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Position
12:complement(16258984..16278810)
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AA seq
407 aa
AA seq
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MTTGARANSSPAVAAHAEGDEIEVLESGETETGSHPDTQWKSLFDKYDPESSGFISAERL
RDLLETHGSELDTHKLEVLLALANGNAEGKVRYQDFMNLMSNKRSNSFRRAIQQGGRQLK
SSSLREEVGLGLSQRLVRHVAYETLPREVDRKWYFDSYTYCPPPWLILTITIAEMAVFVY
YGLLLDRWVLQVSSPSFLKSPLPYHPQRRAQACRYFSYIFMHAGIEHLGLNMAMQLLVGV
PLEMVHGAARIGLIYLCGVLAGDGSLVVSVVDMTAPVVGSSGGVYALVSAHLANVVMNWS
GMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAVPPCPNPSFCAHLGGVAVGLTLGVVV
LQNYEQRLHEQFLFWIFMSVYGLFVLFGIFWNVFAYSLLDVKLPPAP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggagcgcgcgccaactcatcaccggcggtggcggcgcacgcggagggcgac
gagatcgaagtgttagagagcggagagaccgaaaccggatctcacccggacacacagtgg
aaatctctgtttgataagtatgacccagaaagttcgggcttcatcagcgccgaacgtttg
cgtgaccttcttgagacgcatggctctgaactcgacacacacaagctggaggttctgctg
gcgctggctaacgggaacgctgagggaaaagtccgatatcaggatttcatgaacctgatg
agtaataagcggtcaaacagtttccggagggcgatccagcagggagggaggcagctgaag
agctccagcctgagggaggaggtgggactcggtttgtctcagagactcgtccgacacgta
gcgtacgagacgctgccccgggaagtggaccgcaagtggtacttcgacagctacacctac
tgtcctccaccctggctcatcctgaccatcaccatcgcagagatggcggtgtttgtgtat
tatgggctcctgctggaccgctgggttctgcaggtttcgtctccgtccttcctgaagagc
cctctgccctaccaccctcagcgtagagcacaggcctgccgctacttcagctacatcttc
atgcacgctggaatcgagcacctgggcctaaacatggccatgcagctgctggttggtgtt
cctctggagatggttcacggagccgccaggatcggcctcatctacctgtgcggtgttctt
gcaggtgacggttctctggtcgtatctgtggtagacatgactgcccctgtagtcggatca
tcaggaggagtttacgccctcgtctccgcccaccttgccaatgttgtcatgaactggtcg
gggatgaagtgtcagtttaagttgttccggatggcgatggcactggtgtgcatgagtgtg
gagttcggccgtgctgtgtggttgaggttttacccccctgccgtgcccccgtgccccaat
ccgagtttctgtgcccacctgggtggggtggcggtgggcctgacactgggtgtggtcgtg
ctgcagaactacgagcagcggctgcatgagcagttcctcttctggatcttcatgagcgtc
tatggcctcttcgtcctcttcgggatcttctggaacgtcttcgcttatagcctgctggac
gtcaaactcccgccagcaccatga
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