Ictalurus punctatus (channel catfish): 108273048
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Entry
108273048 CDS
T04658
Name
(RefSeq) actin-related protein 3B
KO
K18584
actin-related protein 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04530
Tight junction
ipu04810
Regulation of actin cytoskeleton
ipu05100
Bacterial invasion of epithelial cells
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108273048
09144 Cellular community - eukaryotes
04530 Tight junction
108273048
09142 Cell motility
04810 Regulation of actin cytoskeleton
108273048
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108273048
05100 Bacterial invasion of epithelial cells
108273048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108273048
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108273048
04147 Exosome [BR:
ipu04147
]
108273048
Membrane trafficking [BR:
ipu04131
]
Others
Actin-binding proteins
Arp2/3 complex
108273048
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
108273048
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108273048
Exosomal proteins of other body fluids (saliva and urine)
108273048
Exosomal proteins of bladder cancer cells
108273048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
FtsA
Motif
Other DBs
NCBI-GeneID:
108273048
NCBI-ProteinID:
XP_017337497
Ensembl:
ENSIPUG00000002616
UniProt:
A0A2D0S446
LinkDB
All DBs
Position
1:35404706..35423446
Genome browser
AA seq
418 aa
AA seq
DB search
MAVPLPPCVIDFGTGYMKIGYAGNTEPQFIMPSCIAIRETAGVGDQAQRRLVKGVDDLDF
FIGDEALDKPNYATKWPIRHGIVEDWDLMEKFMEQVIFKYLRAEPEDHNFLVTEPPLNTP
ENREYLAEIMFETFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHAIPV
AEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAIKERFCYICPDIVK
EFTKYDTDPAKWIKKYKGINAVNKNEFQIDVGYERFLGPEIFFHPEFANPDFMEPISDII
DEVIQSCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKP
KPIEVQVITHHMQRYAVWFGGSMLASTPEFFHVCHTKKDYEEHGPSICRHNPVFGIMS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcctttacctccatgtgtcatcgactttgggactggctacatgaagatcggt
tatgctggaaacactgagccgcagtttatcatgccgtcctgcattgcgatcagagagaca
gctggagttggagaccaggctcagagacgcctcgtgaagggagtggatgatctggatttc
ttcatcggtgatgaagcactcgacaagcccaactatgcaaccaagtggcccatcaggcat
ggcatcgtcgaggactgggatctgatggagaagtttatggagcaggtcatttttaaatac
ctcagagccgagccagaagatcacaacttcctcgtgacagagcctcctctgaacacaccg
gagaacagagaatatttagccgagatcatgtttgaaacgttcaacgttcctggcctttac
atcgccgtccaggctgttctggctctagcagcctcgtggacgtccaggcaggttggagag
cgaacgctaacaggaatcgtcattgacagtggagatggagtcacgcatgcgatacctgtg
gcagagggctacgtgattgggagctgtataaagcacatccctatagcaggccgagacatc
acctacttcatccagcagctcctcagagacagagaggtcgggattcctccagaacagtct
ctggagaccgcaaaggcaatcaaggagaggttctgctacatctgcccagacattgtgaaa
gagttcacgaagtacgacacagacccagcgaaatggataaagaaatataaaggcatcaat
gccgtcaacaaaaatgagtttcagatagatgtgggatatgaacgctttcttggaccagag
attttcttccatccagagtttgccaacccggacttcatggagcccatttcagatatcata
gatgaggtcattcagagctgtccgatagatgtgagaaggcctctttacaagaatatagtg
ctctctggaggatccactatgttcagggactttggtcgacggctacaaagggatctgaag
cgtgtagtcgatgccagactccgactcagtgaggagctaagtggaggccggataaagcct
aaaccaattgaggtacaggtgatcacgcatcatatgcagagatatgctgtctggtttgga
gggtccatgttggcttccacgcccgagttcttccatgtgtgtcacacaaagaaagactac
gaagagcacggccccagtatctgtcgacataatccagtgttcggtatcatgtcctaa
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