Ictalurus punctatus (channel catfish): 108273099
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Entry
108273099 CDS
T04658
Name
(RefSeq) (E3-independent) E2 ubiquitin-conjugating enzyme
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108273099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108273099
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
108273099
Ubiquitin system [BR:
ipu04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
108273099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-A_UBE2O
SH3-B_UBE2O
UQ_con
SH3-C_UBE2O
Motif
Other DBs
NCBI-GeneID:
108273099
NCBI-ProteinID:
XP_017337607
Ensembl:
ENSIPUG00000013940
UniProt:
A0A2D0S4F8
LinkDB
All DBs
Position
12:complement(9151947..9194240)
Genome browser
AA seq
1303 aa
AA seq
DB search
MADPAAAEAASSPCPTPGLSPAASPGSEPPSAALSPSAGGAQRLLFSHDLVSGRHRGSLR
FGLVRMIHGEEDWTEDEDEDLDGGGGRDGGGGGGRGKDGGGGGGGGGGGGVGGGGGRVPV
SSDTENGAPESRTWPLGRGFVRVQWYPEGTKQDVRETKLKLEDRSIVPRDFVRRMNSNDK
QCGIVTNINTECAVKLVGTNCCLYPVNSRDLQHIWSFMYGDYIVYDFWLGKVYDLSNRII
LKLSNGARCSMSEEDGAKLYDVYPHVSDSGLFFDEAYGFYPGQVLIGPAKVFSSVQWLYG
VKPVLSKKSKFRVVVEEVQVVELKVTWITKSYSPQGSDSVFPPPSTITQENLCRVKRLGY
FDHTQRQLGERALYVFPAKGDATRITCEGPEGAPVLPEDPVIRKVKRMFKKHPGKKATES
AESQSNSVQTAGKTDEAEERQAPHDHTEENSAPERSNNGPVPNEADEERREQKPTIPQAQ
WPLLGELDSDEDAAEDTDDTSSITSSASSTASLHSGLGRKKSIPLSIRNLKRKHKKKKTK
FSREFKPGDRVAVEVVSTVTSADVMWKDGRLETGIRSNDLIPIQHLDNHEFCPGDYVVDK
RSQALQDPSLYGVIQRGDHKARTCVVKWVKLNAAGDDVEVIGQEEDVSVYDISDHPDFHF
HTTDIVIRIGNSGSEEFNDERTVGQVCRVDVSSKVEVVWADNSKSVVLPQHLYNVESEIE
ETYYDSGEGSTSGASSEEWEDESDSWETDNGQVEEEAGTGGEDSTPKTEALPEAKASTPS
ATAGTDAQGSPATPELPAGGAPASEEKPSKETPRLAFRELKEALKILESLKNMTVEQLWT
GSPTSPIAEPTGATGTATPADAKPTKEKRFLDDIKKLQENLKKTLDNVAIVEEEKMEEER
PSAPAEPQTPVRSEWPSDTPVLCQQSGGKPGVTFTSAKGEVFSVLEWAPDTHTFKKMEFQ
PAEAKKFFSTVRKEMALLATSLPDGIMVKTFEDRMDLFSALIKGPTRTPYEDGLFLFDIQ
LPNIYPAVPPLFRYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWTSKSSLLQVLIS
IQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIKMVQSMTQLLAQPVEVFQQEI
REHFCTSGWRLVQRIESWLELDAAVSERCTRNAGTMRAEPLDEEVPEALAHSSPTGKPES
RGEEELEDSGLGAFKDLSLSSDLDGSRGAEPAQPGGKVAQESQPSVRPKKRRRSYRSFLP
ERSGYPDIGFPLFPLSKGFVKSVRGVLFQYRAALNAAGIPEEK
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccccgcggcggcagaagcagcatcctctccgtgtccgactccgggcctttct
ccagcggcgagtccgggctccgagcctccgtccgcggctctgtctccgtccgcgggcggc
gcgcagcggctccttttctcgcatgacttggtgtccggtcggcaccgcggttcgctgcgc
ttcggcctcgtgcgaatgatccacggagaggaggactggaccgaggacgaggatgaagac
cttgatggcggcggaggtagagacggtggtggtggtggcggtagaggcaaagacggcggc
ggcggtggaggcggtggtggaggaggaggagtcgggggaggcggcggccgcgtcccagtg
agctcggatacagagaatggggcaccggagtcccggacgtggcctctcggtaggggcttc
gtgcgcgtgcagtggtatcccgagggcacgaagcaggatgttcgggaaacgaagttgaaa
cttgaagatcggtccattgtgcctcgagactttgtgcgccgaatgaattcaaatgataag
cagtgcggtatagtgaccaacattaacacggagtgcgcagtgaagctggtggggaccaac
tgttgtctatatcctgtaaatagtcgggacctgcaacacatctggtcttttatgtatggc
gattacattgtgtatgacttctggctggggaaggtgtatgacctcagcaatcgcatcatc
ttgaagctctccaacggagcacgatgttcaatgagtgaagaagacggagccaagctctat
gatgtttacccacatgtcagtgattcggggctgttctttgacgaggcatacggcttttac
ccaggtcaggtcctcatcgggccggctaaggtcttctccagcgtgcagtggctgtacggc
gtgaagcccgtcctcagcaagaagagcaaattcagagtggtggtagaagaggtgcaggtt
gtggagctcaaagtgacgtggatcacgaagagttactctcctcaaggctcggacagtgtc
ttcccccctccgtccaccatcacacaggagaacctctgcagagtgaagcgtctgggatac
tttgaccacacacagaggcagctgggcgagagagctctctacgtctttcctgctaaagga
gatgccacacgaatcacctgtgagggcccagagggggcgccggtcttacccgaggaccca
gtcatccggaaggtcaaacggatgtttaaaaagcacccaggaaagaaggcgacggagagc
gcggaatcgcagtccaacagtgtgcagacggctgggaaaacggacgaagctgaagagcga
caggcacctcatgatcatacagaggagaactctgcgccagagcgctccaataatggcccc
gtcccaaatgaggcagatgaggaaagaagggaacaaaagcccacgataccccaggcacag
tggcctcttcttggggagctggactcggacgaggacgccgcagaggacacggatgacacg
agctcgatcacgtcctcggccagctccacagcctcgctgcacagcggcctgggcagaaag
aagagcattcctctgtctatccgcaacctgaagaggaaacacaagaagaagaagaccaag
ttctctcgagagttcaaaccaggagaccgagtggctgtggaggttgtttccacagttacc
tcagctgatgtgatgtggaaggacggtcgactagaaacaggaatccgttctaacgacctc
atcccaattcaacacctggacaaccacgagttctgccccggagactatgtagtggacaaa
cgcagccaagcactgcaggacccaagtttgtacggcgtgattcagaggggagaccacaag
gccaggacatgtgtggtgaagtgggtcaaactgaacgctgcaggagacgatgtggaggtg
atcggtcaggaggaagatgttagtgtttacgatatatcggatcaccccgacttccacttt
cacactacagacatcgtcatacggataggcaactcgggctcagaggagttcaacgatgaa
aggactgtgggacaggtgtgcagagttgatgtcagcagtaaggtggaggtggtctgggct
gataattctaaatctgtcgtcttgccccagcacctatacaacgtcgagtcggagatcgag
gagacgtattacgactcgggtgagggcagcaccagcggcgcctcctcagaggagtgggag
gatgagagcgacagctgggagaccgataatggccaggttgaggaggaggcggggacaggt
ggagaagactccacccccaaaacagaagctctgcctgaggccaaagcctcgacgcccagt
gccacggctggcacagacgcacaggggtcacctgctacacccgaactgccggcaggtgga
gcaccagcaagcgaggagaaacccagtaaggagaccccacggctggccttccgcgagctc
aaagaggccctgaagatcctggaaagcttgaagaacatgacagtggagcagctgtggacc
ggctcgcccacctcgcccattgctgagccgacaggcgcgactggcactgccaccccggct
gatgccaagcccacgaaggagaaacgcttcctggatgacattaagaagctgcaggagaac
ctgaagaaaacactggacaatgtggccatcgtggaagaggagaagatggaagaggagcgg
ccgtcggcccccgccgagcctcagacaccggtgcgctccgagtggcccagtgatacgcct
gtcctgtgccagcaaagtggcggtaaacccggtgtcacgttcaccagtgccaagggcgag
gtattctctgtgctcgagtgggcgccagacacccacacgtttaaaaagatggagttccag
ccggcggaagcgaagaagttcttcagtacagtcagaaaggagatggctttgctggccacg
tcattgcctgatggcattatggtcaagacatttgaggaccgcatggacctgttctcggct
ctgatcaagggtcctacgcgtaccccatatgaggatggcctgttcttgttcgacatccag
ttgcccaatatctaccccgccgtgccaccactattccgctacctgtcgcagtgcagcgga
cgcctcaacccaaacctctacgacaacggcaaagtgtgcgtcagcctactaggcacatgg
attggcaagggcacagagaggtggacgagcaagtcgagtctcctgcaggtgctcatctct
attcaaggcctgattttggtcaacgagccctattacaatgaggcgggttttgacagtgac
cgcggcctacaggagggctatgaaaacagtcgttgctacaacgagatggccctcatcaag
atggtgcagtccatgacgcagctcctggcgcagccggttgaagtcttccaacaggagatc
cgtgagcacttctgcaccagcggctggagactcgtgcagcgaatcgagtcctggctggag
ctggacgcggccgtgtctgaacgctgtactcgaaacgccggcaccatgcgggctgagcca
ctggacgaggaggttcctgaagcgctggcgcacagcagtcctacaggcaaacccgagtcc
agaggtgaggaggagctcgaagactctggtctcggcgccttcaaggacctcagcctgagc
tcagatttggacggctccagaggggcagagcctgcacagccgggtggcaaagtggcacag
gagtctcagccgtctgtcaggccgaagaaacggaggcggagctatcgcagcttccttcct
gagcgtagcggctacccggacatcggcttcccactctttcccctctcaaaaggctttgtt
aagagcgtgcgtggcgtcctgtttcagtatcgtgcagcactgaacgccgccggcatccct
gaagagaaataa
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