Ictalurus punctatus (channel catfish): 108273150
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Entry
108273150 CDS
T04658
Name
(RefSeq) guanine nucleotide exchange factor VAV3
KO
K05730
guanine nucleotide exchange factor VAV
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108273150
09142 Cell motility
04810 Regulation of actin cytoskeleton
108273150
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
SH3_1
CH
SH3_9
SH2
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
Hormone_5
SH2_1
KinB_sensor
PH_10
LZ3wCH
C1_2
Zn_ribbon_TiaS
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
108273150
NCBI-ProteinID:
XP_017337686
Ensembl:
ENSIPUG00000002833
UniProt:
A0A2D0S5H3
LinkDB
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Position
1:35682397..35779215
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AA seq
829 aa
AA seq
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MEYWRQCALWLIRCRVLPQAHRVTWETARAFDLAQSLRDGVLLCQLLNNLHPQTINLKEI
NLRPQMSQFLCLKNIRTFLSACCEVFAMKKSELFEAFDLFDVRDFGKVIDTLSKLSNTTI
ALQTGIRPFPTEESVEDEDIYNHLKDLIDENGVDDEEDLYDCVYDDDGGEVYEDLMKMEA
GAPPKQVETDIRSCCLAEIRQTEEKYAETLESIEKFFLRPLEQFLTASEINKVFVNIPDL
VKVHKSLLQDVQNSIGHQSASNLYQIFIDYKERLLIYGKYCSHVETAIAYLDELCKEKED
VRQKLEVCSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTNDAVEKTNLRSALDAM
KDLAQYVNEVKRDNETLREIDQYQKSIENLNQPLLNYGRPKGDGEVRVSSVDKRAKQDRH
IFLFDAAVIVCKRRGDVYEMKEVVDLHNFKITNNPTSDKENRKWSYGFYLTHNQGRSGFE
FFFKTKELKKKWLEQFGMAISNIQPENATSNQHEFRMHTFERITACSSCKMLLRGIFNQG
YRCAKCGEGAHKECLARVLMCGKGSGCDMGSSKTQDRSHSRRADPGLPKMLAIRNYRGDP
VPQCGPALNIQQGDIIELIRADLHSSWWQGKVLTTREVGFFPSDAVKPCPCAKPIDYSSQ
AWFAGGMLRVQAEATLLNRQNSTYLVRHRGHDSNEYAISIKFNNDVKHIKILTRDGFFQI
AENRRFKSIMELIEYYKHHSLKEGFRTLDTTLQFAYREPENGGSMLTPKVIGVAIARYDF
SSRDMRELSLQEGDIVRIYSKPTTNGWWRGEVNGRVGWFPSTYVEEEEE
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggagtactggcggcagtgcgcgctctggctgatccggtgtcgcgtgctcccgcaagcg
caccgggtcacctgggaaacggcgcgcgccttcgacctggcgcagagtctccgggacggc
gtgctgctgtgtcagctcctcaacaacctccatcctcaaaccatcaacctgaaggagatc
aacctcaggccacagatgtcccagttcctgtgcctgaagaacatcagaacgttcctgtct
gcctgctgcgaagtgttcgctatgaagaagagcgagctgttcgaggctttcgacctgttc
gacgtgcgcgacttcggcaaggtgatcgacacgctgtccaaactgtccaacacaacaatc
gcactacaaactggaatacggccgtttccgacagaagaaagtgtggaagacgaggacatc
tacaatcacctgaaagacctcatagatgagaatggcgtggatgatgaagaggacctgtat
gactgtgtgtatgatgatgatggtggtgaagtttatgaagacctgatgaagatggaagct
ggagctccaccgaaacaggtggagacagacatcaggagctgctgcttggctgagatcaga
cagacggaggagaagtacgccgagacactggagtctatcgagaaattcttcctcaggccg
ctggagcagtttctcacagcgtccgagatcaacaaggtgttcgtgaacattcctgaccta
gtgaaagtgcacaagagcctgctgcaggacgtgcagaactccatcggccaccagagcgcc
agtaacctctaccagatcttcatcgattacaaggagaggttactgatctacgggaagtac
tgtagccacgtagagaccgccatcgcgtatctggatgagctctgtaaagaaaaagaggac
gtgagacaaaaactagaggtctgttccaaaagggcaaataacgggaagttcacactcaga
gatctccttgtcgttccaatgcaaagggtattgaagtatcatctgcttctccaggagtta
gtgaaacacactaacgatgctgtggagaagaccaacctgcgcagtgctctcgatgccatg
aaggatttggcacagtatgtgaacgaggtgaagagagacaacgagacgctgagggaaatc
gaccaatatcagaaatccattgagaaccttaatcagcctctgttaaattacgggaggccc
aaaggggacggcgaggttcgagtctcatcggtggacaaacgagccaaacaggacaggcac
atcttcctgttcgacgctgccgtgatcgtgtgtaagagacgaggagacgtgtacgagatg
aaggaggtggtcgacctccacaacttcaaaatcaccaacaaccccacctcggataaggag
aaccgcaagtggtcgtacgggttttacctcacacacaatcagggacggagcggcttcgag
ttcttcttcaagaccaaagagctgaagaagaagtggctcgagcagttcggcatggccatc
tccaacatccagccggagaacgccaccagcaaccagcacgagttccgcatgcacacgttc
gagaggatcacggcctgcagctcctgcaagatgttgctcagagggatctttaatcagggt
tatcggtgcgctaaatgtggagaaggagctcataaggaatgtttggccagagtgctaatg
tgtggaaaaggcagcggatgcgatatgggatcctccaaaacacaggaccgatcacacagc
cggagagcagatccaggtttgccaaaaatgttggctataaggaattaccgcggagatccc
gtgccgcaatgtggccccgccctaaacatccagcagggtgacatcatcgagctgatccgc
gcagacctgcacagctcctggtggcagggtaaagtcttgacgacgagagaggttggattc
tttccaagcgacgctgtgaagccttgcccgtgtgccaaacctattgattactcttctcag
gcctggtttgcaggtggcatgctgcgagtgcaggcagaggcgacgcttctgaacaggcag
aacagcacatacctggtgaggcatcgagggcacgacagtaacgagtacgccatcagcatc
aagtttaacaacgacgtgaaacacatcaagatcttaaccagagacggcttcttccagatc
gcagagaacaggaggttcaagagcatcatggagctgattgagtactataagcatcactct
ctaaaggagggcttcaggacactcgatacaacgctacagtttgcctacagagagccagag
aacggagggagcatgttgactccgaaggtgatcggtgtggcgatcgcgcggtacgatttc
agttctcgggacatgagagagctgtcgctgcaggaaggggacatagtgaggatctacagc
aaacccacaactaacgggtggtggaggggcgaggtcaacggccgggtgggctggtttccc
tccacatacgtagaagaagaagaggaatga
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