Ictalurus punctatus (channel catfish): 108273152
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Entry
108273152 CDS
T04658
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108273152
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108273152
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108273152
Protein phosphatases and associated proteins [BR:
ipu01009
]
HAD phosphatases
Fcp/Scp phosphatases
108273152
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108273152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
Biotin_lipoyl
PTCB-BRCT
BRCT
NPBW
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
108273152
NCBI-ProteinID:
XP_053540085
Ensembl:
ENSIPUG00000009817
UniProt:
A0A9F7RC86
LinkDB
All DBs
Position
12:20085523..20106949
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AA seq
941 aa
AA seq
DB search
MEKRADSGGAAAPVGLRMEVTEIRLPAGARSVRLREWKVEPGALVKVDSVIALCVAVPTD
TECGSEDREQPKRRLPEKKVKSDRAGVVRELCYQLGEVISPGDVIARIEECSHPIVMKGL
CAECGQDLTQLQNRNGKQQTPISTAMVSMVHSVPELMVSSEQAEQLGREDQKRLHRNRKL
VLMVDLDQTLIHTTEQHCQNMSTKHRVSVTSQGIFHFQLGRGEPMLHTRIRPYCKEFLEK
ISKMYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGD
SMVCIIDDREDVWKFAPNLITVKKYVYFKGTGDINAPPGSREAQLSKKSAGSQPAENTNP
SGPSSDEGKNNGVRKQDKDKKSLLDEMSVCVPDIQGASASQRTDPDGKRTEKSHLSNKSD
IKVEELGGSDRMRESGETADQENVTVADSDDSAKPGLPHNNSARLSETIKLKQTSLDEEN
CGAEENGDGGLDTDSVCDMDEESFGDNGCSDKKETETESQNSEQSGVTMGEESLDHSMVD
EEEEEIEDDTDQDDHLIYLQEILIRIHNEYYSRYEAHLQGDGSDMPDIRKIVPELKSSSL
AGTNIVFSGLYPTNYPMERTRESYHAKALGAKISKNLVLDAKDPNFTTHLVAARAGTEKV
RQAQVCEQLHVVNPDWLWGCLERWDRVDEQLFPLKEDYTKSQRSNSPSPFPDVQESFPAP
VIDPVSIQPKGPLAPEVHTYDSVTGKLIRRGPQVPRHPQKSSVTLPGHEVHLNFRDSRFL
QQEDVDRSRPDDNQPTPSRRKRQQSLSETMPLYTLCKEDLDSMDREVDDILGEESDNDSE
GKEKEERVEGEEEDEESSRQSYQQALGTAVKDTTSASKEDSSRTGSVPRGHKRKLQDARE
DDDDKDGDFGSQSSKESNEDGSSSEADEMAAALEAELNDFM
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcgcgcggactccggcggggctgcagcacctgtgggcctcaggatggaggtg
acggagatccggctgccggcgggagcgcgctctgtgcggctgcgggagtggaaggtggag
cctggagctctggtgaaggtggactccgtgattgcgttgtgtgtggcggtgcccacggat
acggagtgcggctcggaggaccgagagcagccgaagaggcgattaccggaaaagaaggtg
aagtctgaccgtgctggagtggtgagagagctgtgttatcagctcggagaggtcatatct
cccggggatgttatagcaagaatagaagaatgcagccaccccatagtgatgaagggtctg
tgtgcggagtgtggtcaggacttaacacagttgcagaacaggaatgggaagcagcagacc
cccatctctacagccatggtttccatggtgcacagcgttcccgagctgatggtcagctca
gagcaagcagagcagcttggccgagaagaccagaagaggctccacagaaacaggaagctg
gttctcatggtggatctggaccagactctaatccacaccacagagcagcactgtcaaaac
atgtctaccaaacaccgtgtttctgtgacctcgcagggaattttccatttccagctgggg
agaggggaacccatgctgcacacacgtattaggccttactgcaaagagtttctggagaaa
atctccaagatgtacgagctgcacgtgttcactttcggaagtcgcctctatgcacacacc
attgcaggctttttggatcccgaaaagaaacttttctcacatagaatcctgtctagagat
gagtgcattgacccattctccaagacaggaaatctgagaaatttgttcccatgtggcgac
tccatggtgtgcatcattgacgatagagaggatgtgtggaagtttgcccctaacctcatt
acagtcaaaaaatatgtctacttcaagggaactggggacatcaacgccccacccgggtca
cgagaggcccagctttcaaaaaaaagtgcaggtagccaacctgcagagaacaccaacccc
tccggaccatcatccgacgaggggaagaataatggcgtccggaaacaggacaaggataaa
aagtctctgcttgacgaaatgtcagtctgtgttcctgacattcaaggagcatcagctagc
cagagaactgatcctgatggaaagaggacagaaaagtcacacttgagtaataaatctgat
attaaagtagaagagctgggtggctcagataggatgagggagtccggtgaaactgcagac
caagagaacgtaacagtagctgatagcgatgactcggctaaaccgggattaccacataat
aacagtgcccggctctcagaaaccataaagctgaaacaaacgagcttagatgaggagaat
tgtggtgcagaggagaacggagatggaggattggacacagacagtgtctgtgacatggac
gaagagagttttggtgataatggatgttctgacaagaaggaaactgagacagagtctcag
aacagtgagcagtcaggtgtcaccatgggagaggagtctttagaccacagcatggtggat
gaagaagaggaggagatagaagacgacacggaccaggacgatcacttgatttacctacaa
gagatcttgatccgtattcacaacgagtattactcgcgctacgaggcgcacctccaaggg
gacggctctgacatgcccgacattcgtaagatcgtccctgagctgaagagcagttcgttg
gcaggcaccaacatcgtgttcagtggtttgtaccccacaaactaccccatggagcgaacg
cgagagagctaccatgcaaaagcgctcggcgccaagattagcaagaacctcgtgctcgac
gccaaagatcccaacttcaccacccacttagttgctgcacgggcgggtacggagaaggtc
cggcaggctcaggtctgtgagcagctgcatgtagtgaatccggattggctttggggatgt
ttggagcgatgggatagagtggatgagcagctgttccctcttaaagaggactacacaaaa
tcacagagaagtaatagcccatcaccatttcctgatgttcaagagtccttcccagcgcct
gttattgaccctgtttccatccagcccaaaggcccgctggctccagaggtgcacacgtat
gattctgtaactggcaagttgatccgaagaggccctcaagtgccccgtcacccccaaaaa
tcatctgtgacgctgcctggacatgaagtgcacttaaactttagggattcgagatttctg
cagcaggaagacgttgaccgctcaagaccagatgataatcagcccacaccgtcacgcagg
aaacgacagcagagcctgtctgaaaccatgcctctctacacgctctgcaaggaggacctg
gatagtatggacagagaggtggatgatattcttggagaagaaagtgataacgatagtgag
ggaaaagagaaggaggagagagtggagggagaagaggaagatgaggagagcagcaggcaa
agttaccagcaggccctgggtacggctgtcaaagacacgacatcagcatccaaagaagac
agcagtcggactgggagtgtaccgagaggccacaagagaaaactgcaggatgccagagaa
gacgatgatgacaaagatggagactttggtagccagtccagtaaggagtctaatgaggat
ggtagtagctcagaagcagatgagatggctgctgccctggaggcagagttaaatgacttc
atgtga
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