Ictalurus punctatus (channel catfish): 108273181
Help
Entry
108273181 CDS
T04658
Symbol
lrrfip1b
Name
(RefSeq) leucine-rich repeat flightless-interacting protein 1 isoform X6
KO
K26434
leucine-rich repeat flightless-interacting protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108273181 (lrrfip1b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Other transcription factors
LRRFIP
108273181 (lrrfip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRRFIP
CC_Liprin_beta
CCDC-167
DUF3322
DUF6026
DUF6694
Motif
Other DBs
NCBI-GeneID:
108273181
NCBI-ProteinID:
XP_017337750
Ensembl:
ENSIPUG00000012031
UniProt:
A0A2D0S6A2
LinkDB
All DBs
Position
12:7600261..7660713
Genome browser
AA seq
620 aa
AA seq
DB search
MGTQVTGRKRIPNREKVSAEDDALSQIAREAEARLAAKRAARAEAREIRLKELERQQKEI
SDDEERMSVGSRGSLRPTDYGGFLGSSSRTSSRASSARASPVVEERSDFLEKGSRTASTL
SAATLASLGGGFSRRGSCDTSISVDTEASIRDIKDSLVEAEEKYRKAMVSNAQLDNEKSN
LMYQVDTLRDTLMELEELLYETRRECEVKTKECDRERHAHNVLQFQFDEMKEVLKQNEEL
LKDTQQLRSKQVSYVSEISDLQETLEWKEKKIGALERQKEYSDIIRDERDALRDEVFRLR
DALKKHGISLGSEVTTNGETGSNMTNGPERVESAQDTPAVSSDSVLERSPEDRVPEMDST
SCTEEESKIERDEDTASGARASCSVQLQEDCRVPEANELKRGHSVCVENVSDETVQESVV
AQNEGMIKVGKHVKKQNKQVEEPWIEQDTRATEVPESPLIQDVNETLAPSRFIKTNNQLD
PTTSHTNQADEETLEKMELPGTTKSYQDLRKPIPRTDVEMTSTRRGDRSSSSGQDSETEL
ELESGDVHSGLFTIPVEEKGIASFLDSCQEALALDFEVIRLNKADKARIVHQEETSPTSD
DTKHNRMRLSNKRGQECNVS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgggaactcaggtgacggggaggaaaagaatcccgaaccgggagaaagtgtcggcggag
gatgatgctctgagccaaatagctcgagaggcggaggcaagactggcggccaagcgggcg
gcccgggcggaagctcgagagatccgcttaaaggaactggagaggcagcagaaagagatc
tcagatgacgaggagcggatgtctgttggaagtcggggcagtttgaggcctacggactat
ggggggtttttgggctccagttccagaacctcttcacgggccagttcagctcgggccagc
ccagtggtggaagagaggtcggacttcctggaaaagggatcaaggacggcatctactctc
tctgctgccactttggcctcactaggtgggggcttttctcggagaggtagctgtgatacc
tccatatcggttgacacagaggcctccatacgagatataaaggactctttggttgaggct
gaggagaagtatcgaaaggccatggtgtccaacgctcagctggataatgaaaagtccaac
ctgatgtaccaggtggacacactgcgagacacactaatggagctggaggagctgctttat
gagacacgcagggagtgtgaagtgaaaacaaaggagtgtgatcgagagcggcatgctcac
aatgtcctgcagttccagttcgatgagatgaaggaggtgttaaaacagaacgaggaatta
ctaaaggatacacaacagttgcgctcaaagcaagtgagctatgttagcgagatctctgat
ctacaggaaactctggaatggaaggagaaaaaaatcggggccttagagaggcagaaggaa
tattcggacataatccgagatgaacgtgatgcactgagggatgaggttttccggctcagg
gatgctctaaagaaacacggcatatctcttggatctgaggtgacaacaaatggcgagaca
gggagcaacatgactaatggacctgaacgcgtagaatcagctcaggatacaccagctgtg
agttctgacagtgttttagagagatctccagaggatcgagtgcctgaaatggacagcact
tcatgcacggaagaagaatccaagatagaaagagatgaagatacagcttctggtgcaagg
gcatcatgcagtgtacagcttcaagaggactgcagagttcctgaagcaaatgaacttaaa
aggggtcattcagtttgtgttgaaaatgtatcggacgaaacagttcaagaaagtgtggta
gcacaaaatgaaggcatgatcaaagtgggaaaacatgtgaagaaacaaaacaagcaagtg
gaagaaccttggatagagcaggacacaagagccacggaagtcccggaaagtcctttgatt
caagatgtaaatgaaacacttgcaccatcccgatttattaaaactaacaatcagctcgat
cctacaactagtcatacaaaccaagcagatgaagaaacgttggagaaaatggagctacct
ggaaccaccaaaagctatcaagatctcagaaaacccattccccgcacggatgtcgagatg
accagcaccagaagaggggatcgttcttccagtagtgggcaggactctgaaacagagctg
gaacttgaatcaggggatgttcacagtggtttgtttaccatccctgtggaggagaaaggc
attgcttcatttttagacagttgccaagaagctttggcactggactttgaagtcatacgg
ctaaataaagcagataaggccagaattgtgcatcaggaagagacaagccctacttcagat
gacacgaaacacaacaggatgaggcttagtaacaagagaggacaggagtgtaatgtgtcc
taa
DBGET
integrated database retrieval system
