Ictalurus punctatus (channel catfish): 108273185
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Entry
108273185 CDS
T04658
Symbol
slc6a16b
Name
(RefSeq) solute carrier family 6 member 16b isoform X1
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108273185 (slc6a16b)
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108273185 (slc6a16b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Gate
Motif
Other DBs
NCBI-GeneID:
108273185
NCBI-ProteinID:
XP_017337893
Ensembl:
ENSIPUG00000005776
UniProt:
A0A2D0S563
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Position
1:complement(39042715..39058989)
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AA seq
752 aa
AA seq
DB search
MSSEKPPLPEDGVEVGQVVGPVEVPDAPLDRVRDGWDSKVEYFLAQVGFSVGLGNVWRFP
YLCHQNGGGAFLLLYVLLMVVVGVPLFFLELAVGQSIRQGSIGVWRHISPKLVGIGYSSC
VVCFFVALYYNVIIAWSIFYLFKSFQSPLPWENCPKEGNTTVPECDASSPTSYFWFRKAL
DITDSIDDKGEFNLIITGCLALAWLVVCLAMFKGIKSSGKVMYFSSVFPYLVLLCFLIRG
LTLDGAAEGLKYMFSPKLEIWGDVQVWRQAFTQVFFALGLGFGSIIAYSSYNQRNNNCHR
DAYTVSTINFLTSILASLVVFSVLGFRAKSFTKTCISKNLKLLSEAISSSVTLPPLLINI
TEADSVSVEMYKHWYEVQGNQLNLTGYSISNCSLEDVMNKGVEGTGLAFIAFTEAMTRFP
ASPFWSALFFLMLINLGLSTMFGTMEGILTPLSDTFSSLRNHKLIFTVCSCVLAFVIGLL
FTQRCGNYFVVMFDDYSATLPLIIVVVFQTVSIAWVYGADRFLEDIRQMLGRPVCVVYKF
LWKYVCLLAMLTLLAASLLKMCLKRPQYTAWNRDTASEVKLAYPDWALAMLSTLIIIAVL
PVPLGYAHTMLKQRFSQSALDTEARYAPCSTVDTDSAPLSTLQNADLNPTSSPLAEDGYR
LLPQTGEEEDSSVDMGGLSPPVFHSCGRMDGWMGRGGGGGVSYGSLSDTPSIITVPPALS
PPPLASPFPPPRPPRPAPLRTISAQELQKNFL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagaaaagccaccattgccagaagatggagtagaggtggggcaggtggtgggg
cctgtggaagttcctgatgccccattggacagagtgcgtgatgggtgggacagtaaggtg
gagtatttcctggctcaggtgggattcagtgttggacttgggaacgtgtggagattcccc
tacttgtgtcaccagaacggtggaggagcgttcctgctgctctatgttctgctgatggtg
gtggtcggtgtgccgttgttttttctggagttagcagtgggtcagagtatcagacagggc
agcatcggtgtctggaggcacatctcaccaaaacttgttgggattggctactccagctgc
gtggtgtgtttcttcgtggcactgtattataacgtaatcatcgcttggagtattttttat
ctctttaaatcattccagagtccgttaccctgggagaactgtcctaaagaggggaacacc
acagtacccgagtgtgatgcgagttctcctacatcatacttctggttccgtaaagctctg
gatattacggactctatcgatgacaagggagagtttaacctgatcatcactggctgtctc
gctctcgcctggctcgtcgtctgcctcgccatgttcaagggcatcaagtcttctggcaag
gtgatgtatttctcctccgtgttcccctacctggttctgctgtgcttcctgattcgaggt
ctgacgctggacggagcagcagagggactcaagtacatgttcagtcctaagttggagata
tggggtgatgtacaggtgtggcgtcaggcgttcactcaggtgttctttgctctgggtttg
ggttttggctccatcatagcgtactcctcctacaaccagcgtaataataactgtcaccgt
gatgcctacaccgtctccaccatcaacttcctcacctccatcctcgcctcgctcgtcgtc
ttctctgtgctgggattcagggccaagtccttcaccaagacctgcatctcaaaaaatctg
aaactgttatctgaagcaatctcgtcctcagttactctaccccctcttcttattaacata
acggaggcggactctgtttctgtggagatgtataaacactggtacgaggtgcagggaaat
cagctgaacctcactggctacagcatcagcaactgcagcctggaggacgtcatgaacaag
ggagtagaggggacaggtctggcatttatagccttcactgaggcaatgactcggttcccc
gccagtcccttctggtcagctctgttcttcctcatgctcatcaacctgggactgtccacc
atgttcggtaccatggaggggatcctcaccccactgtctgataccttctcctcactgagg
aaccacaaactcatcttcacagtgtgtagctgtgtgttggcgtttgtgattggtctgttg
ttcactcagcgctgtgggaattactttgtggtgatgtttgatgattactccgccacactg
ccgctcatcatcgtcgtcgttttccagaccgtcagtatcgcctgggtgtatggggcggac
aggttcctggaggatatcagacagatgctgggccgcccagtgtgtgtggtttataagttt
ctgtggaagtacgtgtgtctgttagccatgctgactctgctagcagccagtctactgaaa
atgtgtctaaaacgaccacaatacacagcctggaacagagatacggcatcagaggtgaaa
ttggcctatcctgattgggcattggccatgctctcaacactcatcatcattgcagtactt
cctgttcctctgggttacgcccacaccatgttaaaacagcggttcagccagtcagctctc
gacactgaggcacgatacgccccctgcagcaccgtggacactgactctgcccctctcagc
acgctgcagaatgcggacttaaatcctacctcctccccgttggccgaggatggctacagg
ctcctcccacagactggagaggaggaagactcatcagtggatatgggtggactgtcccct
cctgttttccatagttgtggacgaatggatggatggatggggagaggaggaggaggagga
gtgagttatggttctctctctgacactccctccatcatcactgttcctccagctctctca
cctcctcctcttgcatcaccctttcccccgcctcgcccacctcgccccgcccctctcaga
acaatctccgctcaggagctgcagaagaacttcctctga
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