KEGG   Ictalurus punctatus (channel catfish): 108273198
Entry
108273198         CDS       T04658                                 
Symbol
als2b
Name
(RefSeq) alsin isoform X1
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108273198 (als2b)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    108273198 (als2b)
SSDB
Motif
Pfam: RCC1 MORN RCC1_2 VPS9 RhoGEF PH DUF4005 SOS1_NGEF_PH
Other DBs
NCBI-GeneID: 108273198
NCBI-ProteinID: XP_017337789
Ensembl: ENSIPUG00000020848
UniProt: A0A2D0S4V0
LinkDB
Position
12:13353005..13378104
AA seq 1700 aa
MDKLKSLGEEESSQVRGVLHTWRGYSYSVTPEKVLLSRPVLQAALGAKHGVLLLEGGQVY
SFGELPWKQNPSSLKTTDPILEAGLSEKHVVYVSAGMFHNGAVTEDGAVHMWGDNTYGQC
GLSGLSVVPNPTPVGVVASETTPSRPVRIVEMACGEQHTLALSVEHEVWSWGSGCQLGLH
VSSFPVWKPQKVEHLAGRHVLQVACGASHSLALVRCPPPPHESRRPPEDKCGQCNQLLYT
MTDKEDHVIISDSHYCPLGVELDGDDNNKSASEHGLVHGTPSSRGKMKSSPSEPVLMTHT
QSPKSIFPSMSSPVQAPSPVPESQDQVQIAGEVFVQSDSKDLKESQDPVTNGEVFEAATE
PSTHERENSNATQWLTGTGTKSSQYPDEQALKDYLKRLSAQTLAEQAAKSPSTAQCAQPL
TEPAVVFTLDPSTPVAQSVTPMGSALNNLVVSYASAVGERVASTYEALSLRKVISYWGPG
EERVRQEEHKQGKKSSSLGDIREEEAEGLSRRLSLPGLLSQGTCALHILYHHMLSPRLLR
RVSRPRDHAVALTPAGVAESDARLPSLQTEVWSWGRGQEGQLGHGDVLPRLQPLCIKSLS
GKEVVRVAAGALHSLALTAQSQVYSWGSNSFGQLGHMESPSTIPHLAKLSEGIRAWDIAA
GQHHTLLLADGDCLQPILYYSGQQVKEGSGETAEEESGGYTQQPVLLPFCMNLGYVSSVS
AGGQVCAAMADRNVVGLIASLHELAAAERKYYCKLTNIKSLLLQPLLKLESLSSVLGPSC
TGLLQNLIGRFSRLSQFTGQNSAALTSFLRRSRDLRGLVLLDNAHLFPDSYSEFCAAVGN
MLVMGGFQALVKPCQDVFGKGAETVQKLSECSEDGAMLADVLAHLFYLPIRHLHEYSHLL
LKLTSCYNPSCADYQKLQEAYQKYEALAVHLKRKRKEAEYTLHFWRSFPGKMTDSLRKPS
RRLVCESSNKALTLQNAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWVEPMSDENAGL
YGLKLTSPEESFMLLASSPSEKAKWLRAINQAVEQALSGVGSYTVPPTSGTGLRADPPIS
RTASYTFYKDSRLKDAMYEGRWVAGKPHGRGVLKWPDGRMYTGTFKNGLEDGFGDYILPN
KNLNNSDYYQGHWKDGKMHGFGTFRYATGEVYEGSFQDNMRHGHGMLRSGKLNSTSPSVF
IGQWVNDKKTGYGVFDDITRGEKYMGLWQDDQKQGNGVIVTQFGLYYEGAFSNNKMMGTG
VLLSEDDTTFEGDFSEDWTLNGKGTLTMPNGDYIEGSISGVWGTSLKISGSYYKPNLYDS
EKDKSRALKLGRFSVHPEEKWKAVFGECWSRLGCDTAGQGETRMAWDNIAIALTTNRRQH
RDSPELLSRSHNKTLESLEFIPQHDGPVTLEKYDIIRRYLIKACDTPLHPLGHLVETLVA
VYRMTYVGVGANRRLLQQAVNEIKSYLSRIFQIVRFLFPDLPEEGGLLAEAPNEKKESKS
SSSDLESPKPGRVVSSSALLLPVLLPRLYPPLFTLYALDKEKEDDVYWDCVLRLNKQPDL
ALLAFLGVQQKFWPVAVTAHEEQQQVLPSTKDACFASAVETLQQISTTFTPSDKLQVIQL
TFEEITQEVLTLLKQDFLWSMDDLFPVFLYVVLRARIRNLGSEVSLIEDLMDPCVQHGEH
GIMFTTLKACYYQIQHEKIT
NT seq 5103 nt   +upstreamnt  +downstreamnt
atggataagctgaagagtttgggtgaggaggaaagctctcaggtgcgaggagtgctgcat
acatggagaggttactcctacagtgtcactccagagaaagtgctcctctctcggcccgtg
ctccaggctgccctcggggctaaacacggagttctgctgttggagggtgggcaggtatac
agttttggcgagttaccgtggaaacagaacccatcatctctgaaaacgacagaccctatt
ctggaggcggggctcagcgagaagcatgtggtttacgtgtcagcggggatgttccacaac
ggggcggtgacggaagatggagccgtgcacatgtggggggacaatacttatggccagtgc
ggtctttcaggactctcagtcgtccccaatcccacgccggtgggcgtggtggccagtgag
accacgccctctcggccagtcaggattgtagagatggcatgcggtgaacagcacacgctg
gcactttcagttgagcatgaggtgtggtcatggggcagcggctgccagttaggtttgcat
gtctcgtctttccctgtctggaagccgcagaaagtggagcaccttgccgggaggcatgtg
ctgcaggtggcatgtggcgcctcgcacagccttgcgcttgtgcgctgtccacctcctcct
cacgagtcccgaagacctcctgaggacaagtgcgggcagtgcaatcaattactttacacc
atgaccgacaaggaggatcacgtcatcatctcagacagccactactgccccctgggggtg
gaactcgacggtgacgacaacaacaaatctgcttcggagcatggcctagttcacggaact
cctagttcaaggggcaagatgaaaagttccccatctgaaccggttttaatgacacacacc
cagagccccaagtccatctttccttccatgtctagccctgtccaagcacctagtcctgtt
cctgaatctcaggatcaggttcagattgcaggggaagtgtttgttcagtcagactctaaa
gacctgaaggaatctcaagatccggtgactaacggtgaggtgtttgaagcagccacggag
ccaagcactcatgagagggagaactcaaatgctacccaatggttgaccgggacaggcacc
aaatcctctcaatacccagacgagcaggcactcaaggattacctgaagaggctttcggct
cagacgctggctgagcaggctgctaagagcccgagtacagctcagtgtgcacagcctctc
accgagcccgctgttgttttcaccttggacccctcaacccccgtggcacagtcagtcacc
ccaatgggctctgcactgaacaacctggtggtctcgtatgcgtcagctgtaggggagaga
gtcgcttccacgtacgaggccctctctctgaggaaggtgatcagctactggggtccaggt
gaggagagagtgcgtcaggaggagcacaaacaaggcaagaaaagctcgagtctgggggac
atccgcgaagaggaggcggaggggctgagtcgccgtctctcgctccctggcttgctctca
cagggtacatgcgctctccatatcttataccaccacatgctgtccccacgtctcttacgg
agggtgagtcgcccacgtgaccacgctgttgccctcaccccagctggcgtggctgaatca
gacgcccgcttgccctctctgcagacggaggtgtggagctgggggcggggtcaggagggg
cagctcggacacggagatgtcctgcctagactgcagccgttgtgtattaagagtctgagt
ggcaaagaggtagtgagagtggctgcaggtgccctccactcactggccctgactgcccaa
tcacaggtgtactcctggggcagtaacagctttggtcaactggggcacatggaatccccc
agcaccatccctcatctagccaagttgtcagaggggattcgtgcatgggacatagcagca
ggacagcatcacactctcctattggctgacggagactgccttcagccaatcctctactac
agcggccagcaggtgaaggagggatccggtgagacggccgaggaggagagcgggggttac
acacagcaacccgtacttctgcccttctgcatgaacctgggctacgtgagcagtgtgagt
gcgggtggacaggtgtgtgcagcgatggccgaccgcaacgtggtgggtttaatcgccagt
ctgcacgagctggcagcagccgagagaaagtactactgcaaactgacgaacatcaagagc
ctgcttctgcagccactgcttaaactggaatctttaagctctgtgctgggaccctcatgc
actggactcctccagaacctgattggtcgattcagccgcctatcacagttcacgggtcag
aactcggcagccttgacctccttcctgcggcgctcgcgtgatctcagaggcctggttctc
cttgacaacgcacatctgttcccggactcgtattctgagttctgtgctgcagtgggaaac
atgctggtcatgggtggctttcaggctcttgttaaaccttgccaggatgtgttcgggaag
ggtgcagagacggtccagaaactgtccgagtgttcggaagacggtgcgatgctggccgac
gttctggctcatctgttttaccttcccatccgccatctccacgagtacagccacctgttg
ctcaaactaacatcgtgctacaatccgagctgtgcggactatcagaagctgcaggaggcc
tatcagaagtacgaggctctggctgttcatcttaagaggaagaggaaggaggcggagtac
acgctgcacttctggaggagctttcctggaaagatgaccgactcgctgcgtaagccgtct
cgccgcttggtgtgcgagagcagcaacaaagccctgaccttgcagaacgccggacgcttc
tccgtcaactggttcatccttttcaatgatgctcttgttcacgctcagttctccacccat
cacgtcttcccgttggccacgctgtgggtggagccaatgtctgacgagaacgctggcctg
tacgggttgaagttgacctcacctgaggaaagcttcatgctgctggcttcctcgccatcc
gaaaaggcgaagtggttgcgtgccataaatcaggcagtggagcaggcactaagtggagtg
gggtcatacacagtccctcctacctccgggacgggattgagagcagacccgcccatttcc
cgtactgcctcctacaccttctataaggacagcaggttgaaggacgcgatgtacgagggc
cgctgggtggcaggcaaaccccacgggaggggcgtgttaaaatggccagatggaaggatg
tacaccgggacgtttaagaatggactcgaggatgggtttggcgactatattcttcctaac
aagaaccttaacaacagtgattattaccagggccactggaaggatggcaagatgcacgga
tttgggaccttcaggtatgccacaggagaagtgtacgagggctcgtttcaggataacatg
cgtcacggccatggcatgctgagaagcggcaagctcaactccacctcccccagcgtcttc
atcggccagtgggtgaacgacaagaaaactggctacggcgtgtttgatgacatcacaaga
ggagagaagtacatgggtttatggcaggatgatcagaagcaggggaacggcgttatcgtc
acgcagtttggtctctactacgagggagctttcagcaacaataaaatgatggggacaggt
gttttactttcggaagacgacaccacgttcgagggggatttctcagaagactggactctt
aatggaaaaggtactctgacgatgcctaatggagactacatcgagggttccatcagcgga
gtgtggggaaccagcctgaagatatcggggtcctactacaaaccaaacctgtatgactca
gagaaggacaagagccgggcgcttaaactgggtcggttttccgtgcaccctgaggagaag
tggaaggcggtgtttggggagtgctggagccgcctgggatgtgacacagcgggacaggga
gagaccaggatggcctgggacaacatcgctatagcgctgaccactaacaggagacagcac
agggacagtcctgagctgctgagtcgttcccacaataaaactctggagagcctggagttc
atccctcagcatgacgggcctgttacgttggagaaatatgacatcattcgccgctacctc
atcaaggcgtgtgacacaccgctgcacccactggggcacttggtggagacgttggtagcc
gtgtaccgaatgacgtacgtgggcgtcggagcaaaccgcaggctgctgcagcaggccgtc
aacgagatcaaatcctacctcagccgcatctttcagatcgtcaggtttctgtttcctgat
cttccagaggaaggtgggttgctggctgaggcgccgaacgaaaagaaggaatcaaagtca
tctagcagtgacctcgagtctccaaaaccagggcgtgtggtcagtagctccgccctgctc
ctgcccgtcttgctgccgcgtctctacccgcctctcttcacgctgtacgctctggacaag
gagaaagaagacgacgtgtactgggactgcgtgttgcgtcttaacaagcagcccgacctc
gcgcttctcgcctttttgggagtgcaacagaaattctggcctgtggccgtcacagcacac
gaagaacagcaacaggtcctacccagcactaaagatgcttgttttgcttcagctgtggag
acactacagcaaattagcacgacattcactccctcggacaagctgcaggtcatccagttg
accttcgaggagataacccaggaggtgcttaccttactcaaacaggacttcctgtggtcc
atggacgacctgtttcctgtttttctctacgtggtgctgcgtgctcgaattaggaacttg
gggtcagaggtcagtctgatcgaggacctcatggacccgtgtgtgcagcacggagagcac
ggaatcatgttcaccacattaaaggcgtgttattatcaaattcagcatgagaagatcaca
taa

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