Ictalurus punctatus (channel catfish): 108273275
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Entry
108273275 CDS
T04658
Symbol
desmb
Name
(RefSeq) desmin b
KO
K07610
desmin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108273275 (desmb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108273275 (desmb)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
108273275 (desmb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF7491
TolA_bind_tri
CCDC92
KH_PARP14_8
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
108273275
NCBI-ProteinID:
XP_017337923
Ensembl:
ENSIPUG00000013039
UniProt:
A0A2D0S593
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All DBs
Position
12:8634581..8641659
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AA seq
472 aa
AA seq
DB search
MSRASYASSQSSSYRRAFGGPGFTTTPITRSSMLGRSPGGSHVSSRVYEVTKTASSSPGY
TSYRASSYGIPAHSAGISRSYAAGLGETLDFSLADALNQEFLQTRTNEKVELQHLNDRFA
SYIEKVRFLEQQNQALTVEVERLRGREPTRVADLYEEEMRELRRQIEVVTNQRSRVEVER
DNLVDDLQKLKLRLQEEIEQREEAENNLAAFRADVDAATLARLDLERRIETLQEEIAFLK
KIHEEEIRELQAQMQETQVQIQMDMSKPDLTGALRDIRSQYEAIAAKNIAEAEDWYKSKV
SDLNQAVSKNNEALKQAKLETMEYRHQIQSYTCEVDSLKGTNESLMRQMHDMEDRHGREA
AGFQDTIARLEAEISNMKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRITLPM
QAYSTISFRETSPEHQQRASEMHSKKTVLIKTIETRDGEVVSESTQHQQDIM
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcctcttacgcctcctctcagtcctcctcataccgccgtgccttcggcggg
cccggcttcaccacaacccccattacccgctcctcaatgcttggccgtagccccggaggc
tcacatgtcagctcacgggtctacgaggtcaccaagacggcttcatcatcaccaggctat
accagctaccgcgcgtcttcctatggcatccctgctcattcagcaggcatctcccgctcc
tatgccgccggcttgggtgagacactggacttcagcttggccgatgccctcaaccaggag
ttcctccagacgcgcaccaacgagaaggttgagctgcagcacctgaacgaccgcttcgcc
agctacatcgagaaggtgcgctttctcgagcagcagaaccaggctctgactgtagaagtg
gagcgactgcggggccgagagccaacgcgtgtcgctgacctctatgaagaggagatgagg
gagctgaggcgccagatagaggttgtgaccaatcagaggtcccgagttgaagtggagcgg
gacaacctggttgatgacttgcagaaactcaaactcaggcttcaggaggagattgaacag
agagaggaggccgagaacaaccttgcagcattcagagctgatgtggatgcagccaccctc
gcacgcttggacctggagagacgcatcgaaactctgcaagaggaaatcgccttcctcaag
aagatccacgaggaggagatccgtgagctgcaggctcagatgcaagagactcaggtgcag
atccagatggacatgtccaagcctgatctgactggtgctctgagagacatccgttctcag
tacgaggccatcgccgccaagaacattgctgaggccgaagactggtacaagtccaaggtg
tcagatctgaaccaagcagtatccaagaacaacgaagccctgaagcaggccaagctggag
accatggagtaccgacaccagattcagtcctacacctgtgaggttgactcactgaagggc
acgaacgagtctctgatgaggcagatgcatgacatggaggaccgacatggacgcgaggct
gccggcttccaggacacaattgcccggctggaggctgagatctctaacatgaaggatgag
atggcgcgacacctgcgcgagtaccaggacctgctcaatgtcaagatggccctcgatgtg
gagatcgccacctacaggaagctgctggagggagaagagagcaggattacactgcccatg
caggcctactccacgattagttttagagagaccagcccagagcaccaacaacgagcttct
gaaatgcactcaaagaaaacagtgctcatcaagacgatcgagacccgtgatggcgaggtg
gtgagtgagtccacacagcaccagcaggacatcatgtag
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