Ictalurus punctatus (channel catfish): 108273482
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Entry
108273482 CDS
T04658
Name
(RefSeq) tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108273482
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108273482
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
Agenet
zf-MYND
MYND_ZMYND11_ZMYD8
Velvet
Motif
Other DBs
NCBI-GeneID:
108273482
NCBI-ProteinID:
XP_017338221
Ensembl:
ENSIPUG00000017232
UniProt:
A0A2D0S673
LinkDB
All DBs
Position
13:complement(15150683..15160758)
Genome browser
AA seq
1153 aa
AA seq
DB search
MNRAFSPSLVRPTLPLRRPASGPGPGTPSSLSPVINNQGTCSPQDLSLLTGSLDALKAEG
NRNERGWMPGRDNSANTEPMPAPVTVSLCNYCSKQGNLRCTRCKKTCYCSVACQTEDWKA
HRHICKPSAPESSASDKPKESPTLPCGDGASVLESKVNNIYVVGPKRVYLRDLHKNNLSK
GDEVQASVVEMRTPGKFFIHIQSVEMCETLKNITLNLQKTYGGSPASVYTPEIGEICAVK
FSFDQNWYRGEIESVDLDHHTATVLYIDFGNEEDVKFDQIRPLSANIDSAPPCALQCCIA
GVTAITSSWTGQCCIALRQLVAGKSLTFTVVDVLNSSTVFAVDAPLSTLGKNLSTFLIDQ
GYAMKENNSTKPKIKQDIYSLMNASFENFKCLSDGKNKNTEAQPPEPLSQGVGDTFTAIV
THLQSPSDIICQKLENASVIQQLQTNLREHCIKTQASENFRPAPGTVCCSLFLEDNQWYR
AKVLAYSSEARVCVGYIDFGNSEEVSLNQLRPISMDLIALATQAIPCALAGIKPTSDAWS
EETVVMLKKLVCNRFLRVEILGERDGTALVSMVDESSDPQTNVAELLVSTGHAAVGNMEK
KEAVESPDGPADKLELSCAELPIDGQKVALVVSVLENPGQFYCYNYNAEDLQTLAELSTA
LMKHCEADRTPFNPTVGEPCCALFSDGSWYRGIVQSLEGDGNANVYFVDYGNTRKVQAAH
LRAIKPSLLKLPFQAICCWLAGLEPVGAEWSKDAVQRFQTLCVGKQLTGRALSITEKGYG
VELEYSGQNIAAVLITEQLAKPSGQENKPDSQAATFTEPAEASPAPVPAENHPCTEQPVK
TTGQKPAKSQSSTSTVSFPLDWKTVELPRSKTFQIQVAAVTSPSLFYVINPREVNMEKLQ
SVMTDVTRYCSKQTLPNQSMPLPGAACCAQFSGDKNWYRAVVLGVTSTYASVIYADYGNM
ERVPVSSILPIPKALLQHPFQIARCALSGKEHFPTVWPPEVLELFGVQLSGKVLASVDNF
DGTFNLLNVTEHSAQGHNNINSIILRSLKKSGKSSTDTLTQDTQAQGPGQTRAGSASAHH
LSADPGKPEPQSHEKENMKTTLASMEKEDPQAPPKVTSKAAPASCCCVSLEQKVAHIEEL
LLLLVKQMGGTQK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtgcattttcaccatctctggttaggccaaccctgccattgaggagacctgca
tcaggtccaggtccagggaccccaagcagcctgagccctgtaattaacaaccagggcaca
tgctcaccccaagacctgtctctgttgactggaagcttagatgctctcaaagctgaaggt
aacagaaatgagagagggtggatgcctgggagagataacagtgctaacactgaacccatg
cctgctccagtaacagtgagcctgtgtaattactgcagtaagcaaggcaatctcaggtgc
acacgctgcaaaaagacttgttactgctcagtagcttgtcagacagaggactggaaggcc
catcgccacatttgtaaaccaagtgctccagaaagcagtgcaagtgacaaaccaaaggaa
tccccgacgctaccttgtggtgatggagctagtgttttggaatccaaagtgaacaatatt
tatgtggtgggaccaaagagagtttatctgcgagatttacacaagaataacctctccaaa
ggagatgaagtccaagcatctgtggtggaaatgaggacccctgggaagttcttcatccac
atccagtcagtggagatgtgtgagaccctgaagaacatcacgctaaatcttcagaagacc
tatggtggttcacctgcatctgtgtacacgcctgaaatcggggaaatctgtgctgtgaaa
ttctcttttgatcagaattggtatcgaggtgaaattgagtctgttgatttggatcatcac
actgccacagtgctctacatagactttggaaatgaggaggatgtcaaatttgaccagatt
cgccccctgtcagcaaatattgattctgcaccaccatgtgctctacagtgttgtattgct
ggagtaactgcaattacgagcagttggacaggccaatgttgtattgcattaaggcaactg
gttgctggaaagagcctgactttcactgtggtggatgtcctgaacagtagcactgtgttt
gctgtagatgcgcctctgtccacacttggtaagaatctcagtactttcctgattgaccag
ggctatgcaatgaaagagaacaattccacaaagccaaagatcaagcaagatatctattct
ttaatgaatgcatcatttgaaaacttcaagtgtttgtctgatgggaaaaataagaacact
gaggctcagccaccagagcccttgagtcaaggagtgggagacaccttcacagctatagtc
acccatcttcagtccccttcagacatcatctgccaaaagctagaaaatgccagtgttatt
cagcagttacaaacaaatttgagagaacactgtattaagactcaggccagtgagaacttc
cgtcctgctcctggaactgtctgctgttcccttttcttggaggacaatcagtggtatagg
gccaaagtgctggcatattcctccgaggctcgggtgtgtgtgggttacatagacttcggg
aactctgaagaggtgtcgttgaatcagttgcgtcccatcagtatggatctgatagctttg
gctactcaggcaatcccatgtgccctggcaggtattaagcccacttcagatgcatggtca
gaggagaccgtagtaatgctgaagaaattggtctgtaaccgcttccttcgtgtggagatt
cttggagagcgagatggaacagctttggtctcgatggttgatgagtccagtgatcctcag
actaatgtagctgagctgcttgtttcaacaggccatgctgctgtaggaaatatggaaaaa
aaggaagcagttgaaagccctgatggtccagcagacaaattggagttgtcttgtgcagaa
cttcccattgatggccagaaggtggcgcttgtggtcagtgtactggaaaatcctggacaa
ttctactgctataattataatgcagaagacttgcagaccctggcagagttgtccactgct
ctgatgaagcactgtgaggctgataggactcctttcaaccctactgttggagaaccctgt
tgtgctctcttcagtgatgggagctggtacaggggcattgtgcagagtcttgaaggagat
ggaaatgcaaatgtgtattttgtagattatgggaacactcgtaaagtacaggcagctcat
ctaagagccatcaaacctagcctcctcaaactccctttccaggccatatgttgttggctt
gcaggacttgagcctgtaggagcggagtggagtaaggacgcagtgcagaggtttcagact
ctgtgtgtggggaagcagctcactggcagagcattgtccataaccgaaaagggttatgga
gttgagctggagtatagtggccaaaacattgctgctgtactcattacagaacagcttgcc
aaaccttcaggacaggagaacaagcctgattcacaagcagccacgttcactgaaccagca
gaagcatctcctgcaccggtgcctgctgaaaaccatccgtgcactgagcagccagttaaa
acaactggacaaaaacctgccaaatcacagtccagcacatcaactgtttcatttcctctg
gactggaagacagtggagttgcctcgcagcaagactttccagattcaggtggcagcagtg
accagcccaagtctcttctatgtgataaatcctagagaggtgaacatggagaagttgcag
agtgttatgacggatgtgacgaggtattgcagcaagcagaccctgcccaaccagagcatg
cctttacctggagcagcctgctgtgctcagttctcaggtgacaaaaattggtacagagct
gttgtattgggagttacaagcacatatgcaagtgtgatttatgcggactatgggaacatg
gagagggttcctgtctccagcatcctgcccatcccgaaagcacttctgcagcacccgttt
caaatagctagatgtgctctttcaggtaaagagcacttcccgactgtgtggcctcctgag
gtcctggagctttttggtgtacagctcagtggcaaagtgctggcctccgtagataatttt
gatggcacctttaacctgctaaatgttaccgagcactccgctcaaggacacaacaacatc
aactccattattttaaggtcactgaagaaatctggcaagtctagcacagatactctgact
caagacacacaggcccagggacctgggcagacacgagctggtagtgcctcagctcatcat
ttatccgcagaccctgggaagcccgaacctcaaagtcacgaaaaagaaaatatgaagact
acgctggccagcatggaaaaggaggacccacaagcccctccaaaggttacaagcaaagca
gctcctgcttcgtgctgttgtgtgtcccttgagcagaaggttgcccacattgaggagttg
ctccttcttcttgtgaagcaaatgggtggaacacaaaagtaa
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