Ictalurus punctatus (channel catfish): 108273485
Help
Entry
108273485 CDS
T04658
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108273485
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
108273485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
TPR_8
TPR_14
TPR_16
TPR_19
TPR_CcmH_CycH
TPR_17
CFAP70_TPR_C
CFAP70_mid_TPR
TPR_7
TPR-S
TPR_Psidin_N
TPR_20
TTC22_C
TPR_NPHP3
TPR_4
Motif
Other DBs
NCBI-GeneID:
108273485
NCBI-ProteinID:
XP_017338228
Ensembl:
ENSIPUG00000003700
UniProt:
A0A2D0S658
LinkDB
All DBs
Position
13:complement(11748592..11751651)
Genome browser
AA seq
471 aa
AA seq
DB search
MSSTQDIILKTKLIQLECHFTWALNENDTDLTDLLNRLEEQLDLDLGREEGAARTHSSMG
FVKFLLGSNTEALSNLERSVELTKSRGNDCDKLLVVAYGDLAWLYHRMGNFAECESYLNK
LREIKEKYPSVPYAEVLGEKGWTFLKFSWKYNERAKECFRKALELDPEEGEWNAGLAIAL
YRAEDMLEDPVVIDQLRRAIATNPDDDVLKVLLGLRLVAHKKYSEAESLVEQALERSPEH
PHVMRYVGKYFRIEGSVDRSIALLKRALEKVSNAGFIHHQLGLCYKKKILNLMQAGSHHT
KGAEIKRIREQCIYHLEMATELKTSFIIAMNELAFQYGANQNMSRAEEMFQNTFKAAREK
KDNYQSVHYYYANFQQYCMKCEPAAIKHYTECLKINPNTYHGSKSAKSLQKIAERRIENN
PRDGEAFGILGIIHKEKGEKQQAIECFEQALSFVDKEDYLTDLCELRLSLE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaacacaagacatcattttaaaaaccaaacttattcagctggaatgccatttt
acctgggctctgaatgaaaatgatacagatctcaccgatcttctgaacaggctcgaagaa
cagcttgacctggatcttggaagggaggaaggagctgcgcgcacacacagcagtatggga
tttgtgaagtttctactaggctccaatactgaggctctcagcaacttagaaagatctgta
gagctcaccaagtctcgtggaaatgactgtgacaagctgcttgttgttgcctatggagac
cttgcatggttataccatcgtatgggtaattttgcagaatgtgaaagctacctgaataaa
ctgagggaaattaaagagaaatatccatctgtcccatatgccgaggtgcttggagaaaaa
ggatggaccttcctcaagttttcttggaaatataatgaaagggctaaagagtgcttcagg
aaggccctggagctggacccagaggagggtgaatggaatgccggccttgccattgctctg
tatcgggcagaggatatgctggaagatccagtggtaattgatcaacttagacgggccata
gccactaacccagatgatgatgttcttaaagttctgcttggtttaagattggttgctcac
aagaagtatagcgaggcagagagcctagtggagcaagccttagagaggtctccagaacac
ccccatgtgatgcgatatgttgggaagtatttccggattgaaggatctgtggacaggtct
attgcccttctaaagagagcattagagaaagtgtccaatgcaggctttatacaccatcag
ctggggctctgctataagaaaaagatcctgaatctgatgcaagcaggaagccaccacaca
aaaggtgctgaaattaagcgaattcgagagcagtgtatctaccatttggagatggcaact
gaactgaagactagcttcatcattgctatgaatgaactggccttccagtatggggcgaat
cagaatatgtcaagagcagaagaaatgttccagaatacatttaaggcagctagagaaaaa
aaagataactaccagtctgttcattactattatgcaaacttccagcagtactgtatgaaa
tgtgagcctgctgccatcaaacactacactgaatgtttgaagataaatccaaatacatat
catgggagtaaaagtgctaaaagtctgcaaaagattgcagagagaagaattgagaacaac
ccaagggatggagaggcctttggaatacttggaatcattcataaggaaaaaggagaaaaa
caacaagccatagagtgctttgagcaagcgctgagctttgtagacaaagaggattacctc
acagatctttgtgaacttaggctttcattggagtaa
DBGET
integrated database retrieval system
