Ictalurus punctatus (channel catfish): 108273492
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Entry
108273492 CDS
T04658
Symbol
grin2cb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108273492 (grin2cb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108273492 (grin2cb)
04082 Neuroactive ligand signaling
108273492 (grin2cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108273492 (grin2cb)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108273492 (grin2cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
MatE
Motif
Other DBs
NCBI-GeneID:
108273492
NCBI-ProteinID:
XP_017338247
Ensembl:
ENSIPUG00000012535
UniProt:
A0A2D0S698
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All DBs
Position
13:complement(16867091..16895564)
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AA seq
1331 aa
AA seq
DB search
MAIHQGCLCLSLQLLLLLAAMPHYQARPFFGPPTVNVAVVFSSSGHQGEIKGRLSRENFL
DLPLDVNPITVLVNDTSPSALLTRLCQTMAAESLHGVVFEDDVDSEAIAQILDFLSSQTS
IPIIGISGGSALVIPHKAEGSTFLQMGASIEQQINTMFKVMEEYNWGSFVVITSLHPGYE
NFVDYIHSFTDSSYFLWELQDVLSFEMSVGANDIRSRRLLQQVDAQVYLVYCSHEEAQYL
FRMASDVGLLGPGYIWVIPSLAVGNPEASPPDSFPIGVISIISDHWRKTLRQRVREGVAV
VVQGVYSFHKHRGFVPEAHRQCNSSAKSYDHYSLFRHMINVTWEHRDLSFSSHGYLTNPS
MVIITLDRERLWDKVGSYEGGILHMRYPVWPRYGSFLEPVSDNRHLTVATLEERPFVIVE
SVDPSTGTCVRNTVPCRRQANRTEVGIGHSEPYTKLCCKGFCIDILKKLSRTIRFSYDLY
LVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVA
RSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYFSPVGYNRSIINAKEPGGPT
FTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQY
IDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHSHMTKYNQKGVEEALN
SLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRPIDLA
LLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWE
HLLYWKIRHCVHNSDRLDFLLAISRGIYSCFNGVEDMGKSGNLQNLDITANYAQANMLKM
LQTAKDIVSSAKVENSLDKATKTIENWSRKGGSLPARIPQVTTTETLPANLSYMTNITEK
HSSLVQRSLPPQFTQHYAETASPPHASTQRLISHPTPLHYTVPSRSGGLYNGLLPMTSVS
TPHLATYDMHSQKSAKMASRFISHKDLQAPDIFAEHQEPCHTFVGPRWKNRSQSCLEESV
DLRGLHDDKGHNVHLAEVQADHFAHDVHPSMEIPYRPGNVTCNSCIKTYADPRLDGMPLI
GKRKIHRRPSFLKATWGPGRVQFPNERPLDPGSCQVDMPDLFPFTEVCGRGRNNKYQPLP
VEHIYLHSYRRQPRKGQKLRHSQSTYLPSYREAVHHDAIGVRRASSLVHRQYSYPDLPAY
QSPLPYGPVELCNIFPCMGHPSDSGYRGYRAPVHLQDGHLLPVPGSRVLYRVGSPGVPLT
WGRISSLESEV
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggccattcatcaggggtgtttgtgtctctctctccagctcctcctgttgcttgctgcc
atgccacactaccaggctcgtcctttctttggcccacctacagttaatgtggcagtggtg
ttcagcagttctggccaccagggtgaaataaagggtcgtctgagccgggagaacttcctg
gacctgccgctggatgtgaaccccatcactgtgctagtaaatgatacaagtcctagtgca
ctgcttacacgcctctgtcagacaatggctgctgagagcctccatggtgtggtgttcgag
gatgatgttgactcagaggctatagctcagatcttagactttctatcctcccagacttcc
atacccataattggcatcagtggaggctctgccttagtcatccctcacaaggctgaaggt
tcgactttcctccagatgggagcttccattgagcagcagatcaatactatgttcaaagta
atggaggaatacaactggggcagctttgtggtgatcaccagccttcatccaggctatgaa
aattttgtggactacatccactctttcacagactcaagctactttctttgggagctgcag
gatgtgctaagctttgagatgtcagtgggtgccaatgacatccgctcacgccggctgctg
caacaggtggatgctcaggtgtatctggtgtactgctcacacgaggaggctcagtatctt
ttcaggatggcatctgatgttgggctcttgggacctggctacatttgggtcatccccagc
ctggcggtaggaaacccagaggcttcacctccagatagttttccaattggggtcatcagc
attatttcagaccactggaggaaaactctgcgccagagggtgagggaaggagtggccgtg
gtggtgcagggggtgtacagttttcacaagcatcgaggatttgttcctgaagctcacaga
caatgtaacagttcagcaaaatcatatgaccactattcactttttagacatatgataaat
gtgacatgggagcacagagacttgtctttcagttctcatggctatctcacaaatccctcc
atggtgatcatcactttggaccgagagaggctctgggacaaggtagggagttatgaggga
ggaattctgcacatgcgctacccagtttggccccgctatggcagcttcttggagcctgtg
tctgataaccgtcacctgacagtagccacactggaggagaggccctttgtcatcgtggag
agtgtcgatccaagcacagggacatgtgtgaggaacaccgtgccctgtcgtcgtcaggct
aacaggactgaagttggtattggtcattcagagccttacaccaaactgtgctgcaagggc
ttctgcatcgacattctcaagaagctctcgcgcaccatcaggttctcctatgatctctac
ttggtcaccaacggtaaacatgggaagctggtccgaggcatctggaatgggatgataggc
gaggtcttctacaagcgtgcagatatggctattggctcactcactattaatgaggagcgt
tcagagatcattgacttttcagtgccattcgtggagactgggattagtgtcatggtagct
aggagcaatggcactgtctccccatctgcttttctagagccttacagtccagcagtgtgg
gtcatgatgtttgttatgtgcctgactgttgtggctgtaacagtgttcatctttgagtac
tttagccctgttggatacaaccgtagcataatcaatgccaaagagcctgggggacccaca
ttcactattgggaagtcagtctggctcctatgggggattgtctttaataactctgtccct
atagaaaaccctaaaggaacaaccagcaagattatggtgctagtttgggccttctttgct
gtcatctttctagccagttatactgcaaatttagctgccttcatgatccaagagcagtat
attgacactgtatctgggctcagtgacaaaaagtttcagaagccccaggagcattacccc
cctttccgcttcggcacagtcccaaacggcagcactgagagaaatattcgcagcaattat
ccagacatgcacagccacatgaccaaatacaaccaaaagggagtggaagaggctctcaac
agtctcaaaacagggaagctggatgccttcatatatgatgctgcagtgcttaattacatg
gctggcaaggatgagggctgcaagctggtgaccattggcagtgggaaggtgtttgctaca
acaggctatggcattgctttgcagaaggactcccgttggaaacgccccatagacctggct
ctcctccagttcctgggagatggggacacacagagactggaaactgtatggctgtctgga
atctgccagaatgagaagaatgaagtgatgagttccaagttggacatagacaacatggca
ggtgtcttctacatgctactagtggctatgggtcttagtctgcttgtctttgcctgggaa
catctgctttattggaaaatcagacactgtgtgcacaattctgaccgtctagacttcctc
ttggccataagcaggggaatttacagctgctttaatggtgttgaagacatgggaaaatct
ggaaacttgcagaatcttgacatcacagcaaactatgcccaggctaacatgcttaaaatg
cttcagacagccaaagacattgtctcctcagcaaaggtggagaattctttggacaaggca
acaaaaaccattgaaaactggagtcggaaaggtgggagtttaccagcacggattccccag
gtgaccaccactgagacactcccagcaaacctctcgtacatgactaacatcacggaaaag
cattcatcccttgtgcagcgctctttaccgccccaattcacgcagcattatgctgaaact
gccagtccaccacatgcatctactcaaagactgatatcacaccccactccactacactac
accgtcccttcccgatctggtggcctgtataatgggctgcttcccatgactagtgttagc
actcctcatttagcaacatatgatatgcattcccaaaagtcagccaaaatggcctctcgt
ttcatctcacataaagatttacaagcaccagacatcttcgctgagcatcaggaaccttgc
cacacctttgtaggccccagatggaaaaatagatcccaaagctgtctggaggagtctgtg
gatcttagaggattacatgatgacaaaggccacaatgtgcatcttgcagaagtccaagca
gaccattttgctcatgatgtacacccttctatggaaatcccttatcgaccaggcaatgtt
acctgtaattcctgcattaagacatatgcagatcctcggttagatggcatgcctttaata
ggaaagagaaaaatccatcgcaggccctccttccttaaagccacctggggcccaggcagg
gtgcagtttccaaatgaaaggcctcttgacccaggctcatgtcaagtggacatgccagat
ctgtttcctttcacagaggtttgtggaagagggagaaataacaaataccaacctttgcct
gtggaacacatttaccttcactcatatcgccgccagccaagaaagggtcagaagttaagg
cactcccagtccacttatctgccctcttacagggaagcagtacatcatgatgccataggt
gtgaggagggcctccagccttgtacatagacaatactcctaccctgaccttccagcctac
cagagcccactgccatatggaccagttgagctgtgcaacatcttcccctgcatgggccat
cctagtgacagtggatatagagggtatagggctcctgtacacctgcaggatggccatctg
ctccctgttccaggcagcagggtgctttacagggtcggctccccaggtgtacctctgaca
tggggaaggatctctagtctggagtctgaggtgtga
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