Ictalurus punctatus (channel catfish): 108273506
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Entry
108273506 CDS
T04658
Symbol
six2b
Name
(RefSeq) homeobox protein SIX2b
KO
K19472
homeobox protein SIX2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108273506 (six2b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
108273506 (six2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
108273506
NCBI-ProteinID:
XP_017338267
Ensembl:
ENSIPUG00000007963
UniProt:
W5U905
LinkDB
All DBs
Position
13:complement(20690727..20703464)
Genome browser
AA seq
302 aa
AA seq
DB search
MAAVPPTFGFTQEQVACVCEVLQQGGSIERLGRFLWSLPACEHLHKNESVLKAKAVVAFH
RGNFRELYKVLESHQFSPHNHGKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPR
TIWDGEETSYCFKEKSRCVLKEWYSHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD
RAAEAKERENEGANQNGHNPLPSQMTESKSQCESSDDDKSPPGTPDHLSMSPALLLPTSS
GLPPLHSFAPPAGPSASDTHHPHPHLHHPHPHHQHSHHEQQHLSLHDSLLNPMAASLVDL
GS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggtgccgccgacctttggcttcacgcaggaacaagtggcgtgtgtgtgtgag
gtgctgcagcagggagggagcatcgagcgcctcggccgcttcttgtggtcgctacccgcc
tgcgagcacctgcacaagaacgagtccgtgctcaaggccaaggccgtggtggctttccac
cgagggaactttcgtgaactctacaaggtactagagagccaccagttctcgccgcacaac
cacggcaagctgcagcagctgtggctcaaggcgcactacatcgaggcagagaagctgcgc
gggcgaccgctcggcgccgtgggcaagtaccgggtgcgcaggaagttcccgctgccgcgc
accatctgggacggtgaggagacaagctactgtttcaaggagaaaagtcgttgcgtactt
aaagaatggtactcccataatccttatccctcaccgagagagaaacgcgagctggccgag
gccacagggctcacaaccacgcaggtcagcaactggttcaagaaccgcaggcagagagac
cgcgccgctgaggccaaggagagggaaaacgagggtgcgaatcaaaatgggcacaacccg
ctaccatctcaaatgaccgagagcaaatctcagtgcgagagctcggacgacgataaatct
ccgccagggaccccagatcatctgtccatgagtcctgctctgcttttacccaccagctca
ggcctgccaccactgcacagcttcgcacccccggccggacccagcgcctctgacacacac
catcctcatcctcatcttcatcatcctcaccctcatcaccagcacagccaccatgagcag
cagcatctgtccctgcatgacagcctcctcaaccccatggcggccagcctggtggacctt
ggctcctaa
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integrated database retrieval system
