Ictalurus punctatus (channel catfish): 108273578
Help
Entry
108273578 CDS
T04658
Symbol
ngfrb
Name
(RefSeq) nerve growth factor receptor b
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ipu04010
MAPK signaling pathway
ipu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
108273578 (ngfrb)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108273578 (ngfrb)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108273578 (ngfrb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ipu04050
]
108273578 (ngfrb)
04090 CD molecules [BR:
ipu04090
]
108273578 (ngfrb)
Cytokine receptors [BR:
ipu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108273578 (ngfrb)
CD molecules [BR:
ipu04090
]
Proteins
108273578 (ngfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
108273578
NCBI-ProteinID:
XP_017338390
Ensembl:
ENSIPUG00000017383
UniProt:
W5UQT0
LinkDB
All DBs
Position
13:1505875..1544743
Genome browser
AA seq
409 aa
AA seq
DB search
MYAAVLAAVFGVVGVFSAQQVCHSGQYTTSGECCKQCPPGEGAVKPCGETQTVCQPCLDS
ETFSESFSHTAKCRKCTECTGLLRMETPCTDANDATCVCDYGYFMSPITGQCQACTACPL
GSGVLRRCALEQDTICEMCMDDTYSDQESELNLCLPCTICEDTEELQHCTAVSDTVCQDS
NLLNSSSTPLSSLEPSEPLFNFTTFPSEYLPEPMENMPTTGPEPKTLGLGDNLIPLYASI
VPAVLLGLFAFIVIKRWKSCKHNKQDGSTRSGTENPSQTPSPEGEKLHSDSGISVDSQSL
QEGQGLAQTVVKIDEGLSLPLHASKELEKLLDDAAPLENDWSSLAGLLGYEEERIASFGQ
EERPVRALLSDWASRDSASVDALCAALRKINREDLAQSIMPKSTATSVV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtacgctgcagtgctcgcggcagtgttcggagtggtgggcgtgttctcggctcagcaa
gtgtgtcattcaggacagtacaccaccagcggcgagtgctgcaaacagtgcccgccgggc
gagggcgcggtcaagccgtgtggagagacgcaaacagtgtgtcagccgtgcctcgacagt
gagacgttctcggagagcttcagccacacagcaaaatgcaggaaatgcacagagtgcact
gggctgttacgcatggagacgccatgcacggatgccaacgacgccacctgcgtgtgcgac
tatggctacttcatgtcacccataacggggcagtgccaggcgtgcacggcgtgtccattg
ggcagcggcgtgctgaggcgctgcgccctcgagcaggacaccatatgcgagatgtgcatg
gacgacacatactcagaccaggagagcgagctcaacttgtgcctgccgtgcaccatctgc
gaggatacagaggagctccagcactgcaccgccgtcagcgacaccgtgtgccaagactcg
aaccttctgaattcttcaagcacaccactgtcctctctggagccatcagaacctctgttc
aacttcaccacctttccatcggaatacctgccagaacccatggagaacatgcccaccact
ggtcctgaacccaagacactgggcctaggtgataatctcattcccctgtatgcctccatt
gtacctgctgtgctgctcggcctctttgccttcatcgtcatcaaaaggtggaagagctgc
aaacacaacaaacaagatggtagtactcgatcgggcacggagaacccgagccagacgccg
tcaccggagggagaaaaactgcacagcgacagtggcatctctgtagatagccagagttta
caggagggacaaggcctggcacaaacagtggtgaagatcgacgaaggcctgagtttgccc
ctgcatgctagcaaagagttggagaagctcctggatgatgcggcaccgctggaaaacgac
tggtccagcctggccggcttgctcgggtacgaagaagagcgcattgcctctttcggccag
gaggagaggccagtccgagcgctgctgagtgactgggcgagccgtgactctgccagcgtc
gacgcgctgtgcgctgcactgaggaaaatcaaccgggaagatctcgctcagagcatcatg
cccaagtccacggctacctccgtcgtgtga
DBGET
integrated database retrieval system