KEGG   Ictalurus punctatus (channel catfish): 108273578
Entry
108273578         CDS       T04658                                 
Symbol
ngfrb
Name
(RefSeq) nerve growth factor receptor b
  KO
K02583  tumor necrosis factor receptor superfamily member 16
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
ipu04010  MAPK signaling pathway
ipu04060  Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    108273578 (ngfrb)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108273578 (ngfrb)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    108273578 (ngfrb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:ipu04050]
    108273578 (ngfrb)
   04090 CD molecules [BR:ipu04090]
    108273578 (ngfrb)
Cytokine receptors [BR:ipu04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   108273578 (ngfrb)
CD molecules [BR:ipu04090]
 Proteins
  108273578 (ngfrb)
SSDB
Motif
Pfam: TNFR_c6 TNFR_16_TM Death bDLD3
Other DBs
NCBI-GeneID: 108273578
NCBI-ProteinID: XP_017338390
Ensembl: ENSIPUG00000017383
UniProt: W5UQT0
LinkDB
Position
13:1505875..1544743
AA seq 409 aa
MYAAVLAAVFGVVGVFSAQQVCHSGQYTTSGECCKQCPPGEGAVKPCGETQTVCQPCLDS
ETFSESFSHTAKCRKCTECTGLLRMETPCTDANDATCVCDYGYFMSPITGQCQACTACPL
GSGVLRRCALEQDTICEMCMDDTYSDQESELNLCLPCTICEDTEELQHCTAVSDTVCQDS
NLLNSSSTPLSSLEPSEPLFNFTTFPSEYLPEPMENMPTTGPEPKTLGLGDNLIPLYASI
VPAVLLGLFAFIVIKRWKSCKHNKQDGSTRSGTENPSQTPSPEGEKLHSDSGISVDSQSL
QEGQGLAQTVVKIDEGLSLPLHASKELEKLLDDAAPLENDWSSLAGLLGYEEERIASFGQ
EERPVRALLSDWASRDSASVDALCAALRKINREDLAQSIMPKSTATSVV
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgtacgctgcagtgctcgcggcagtgttcggagtggtgggcgtgttctcggctcagcaa
gtgtgtcattcaggacagtacaccaccagcggcgagtgctgcaaacagtgcccgccgggc
gagggcgcggtcaagccgtgtggagagacgcaaacagtgtgtcagccgtgcctcgacagt
gagacgttctcggagagcttcagccacacagcaaaatgcaggaaatgcacagagtgcact
gggctgttacgcatggagacgccatgcacggatgccaacgacgccacctgcgtgtgcgac
tatggctacttcatgtcacccataacggggcagtgccaggcgtgcacggcgtgtccattg
ggcagcggcgtgctgaggcgctgcgccctcgagcaggacaccatatgcgagatgtgcatg
gacgacacatactcagaccaggagagcgagctcaacttgtgcctgccgtgcaccatctgc
gaggatacagaggagctccagcactgcaccgccgtcagcgacaccgtgtgccaagactcg
aaccttctgaattcttcaagcacaccactgtcctctctggagccatcagaacctctgttc
aacttcaccacctttccatcggaatacctgccagaacccatggagaacatgcccaccact
ggtcctgaacccaagacactgggcctaggtgataatctcattcccctgtatgcctccatt
gtacctgctgtgctgctcggcctctttgccttcatcgtcatcaaaaggtggaagagctgc
aaacacaacaaacaagatggtagtactcgatcgggcacggagaacccgagccagacgccg
tcaccggagggagaaaaactgcacagcgacagtggcatctctgtagatagccagagttta
caggagggacaaggcctggcacaaacagtggtgaagatcgacgaaggcctgagtttgccc
ctgcatgctagcaaagagttggagaagctcctggatgatgcggcaccgctggaaaacgac
tggtccagcctggccggcttgctcgggtacgaagaagagcgcattgcctctttcggccag
gaggagaggccagtccgagcgctgctgagtgactgggcgagccgtgactctgccagcgtc
gacgcgctgtgcgctgcactgaggaaaatcaaccgggaagatctcgctcagagcatcatg
cccaagtccacggctacctccgtcgtgtga

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