Ictalurus punctatus (channel catfish): 108273584
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Entry
108273584 CDS
T04658
Symbol
atxn7l3b
Name
(RefSeq) ataxin-7-like protein 3 isoform X1
KO
K11363
SAGA-associated factor 11
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108273584 (atxn7l3b)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108273584 (atxn7l3b)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108273584 (atxn7l3b)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
108273584 (atxn7l3b)
SLIK complex
108273584 (atxn7l3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sgf11
FXMRP1_C_core
zf-C2HC_2
Med19
Motif
Other DBs
NCBI-GeneID:
108273584
NCBI-ProteinID:
XP_017338401
UniProt:
A0A2D0S6M7
LinkDB
All DBs
Position
13:complement(1471372..1479575)
Genome browser
AA seq
187 aa
AA seq
DB search
MKMEETALSGTDNSKMEGIAQEILSDLVEDACLGLCFEVHRAVKQGYFFLDDTDQESMKD
FEIVDQPGVDIFGQVYNQWKNKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRI
ASGNNTNKSESDQEDNDDVNDNDWSYGAEKKAKKRKADKNPNSPRRSKSLKHKNTKDLSS
SFSFAGS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggaggagacggccctgtccggcacggacaacagcaaaatggagggcattgct
caggagattctctccgatctggtggaggacgcatgtctggggctttgcttcgaagttcac
cgggccgtcaagcaaggctacttcttcctggacgacacggaccaggagagcatgaaggac
tttgaaatcgtggaccagcccggagtggacatcttcggccaggtatataaccagtggaag
aataaggagtgtgtgtgtcccaactgcagccggagcatcgccgcctcgcgcttcgcccct
cacctagagaagtgcctgggcatgggtcgcaacagcagccgcatcgccaaccgcaggata
gccagcggcaacaacacgaacaaatccgagagcgatcaggaggacaacgacgacgttaac
gacaacgactggtcctacggggcagaaaagaaagccaagaagagaaaggcagataagaat
ccaaattcaccaagacgatccaaatcgctaaaacacaaaaacaccaaagatctgtcttcg
tccttcagcttcgctggatcctaa
DBGET
integrated database retrieval system
