Ictalurus punctatus (channel catfish): 108273591
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Entry
108273591 CDS
T04658
Symbol
pax2b
Name
(RefSeq) paired box protein Pax-2b
KO
K15608
paired box protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108273591 (pax2b)
04131 Membrane trafficking [BR:
ipu04131
]
108273591 (pax2b)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108273591 (pax2b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108273591 (pax2b)
Membrane trafficking [BR:
ipu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
108273591 (pax2b)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
108273591 (pax2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
Homeodomain
HTH_Tnp_IS1
DUF7739
Motif
Other DBs
NCBI-GeneID:
108273591
NCBI-ProteinID:
XP_053541086
Ensembl:
ENSIPUG00000005437
UniProt:
A0A9F7RF83
LinkDB
All DBs
Position
13:complement(23334366..23357697)
Genome browser
AA seq
387 aa
AA seq
DB search
MDIHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRHNPTMFAWEIRDRLLA
EGICDNDTVPSVSSINRIIRTKVQQQYHPSPDGTSLSTPGHTIVPSTASPPVSSGSSDPV
GSYSINGILGIPRSNGEKRKRDDDGSEGSGQNSDSQGSVESLRKHLRADAFTQQQLEALD
RVFERPAYPDVFHNTEHIKPEQASEYALPALNPGLDEVKPSLSSSSSSDLGASVSQSYPV
GRDMANTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEAWRFSNP
ALLSSPYYYSASRASAPPAAAAAYDRH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagaccccttctccgccatgcacccagggcatggcggagtg
aaccagctgggcggtgtattcgtgaacggcaggccgctaccggacgtcgtgcggcagaga
atcgtggagctcgcgcaccagggagtgagaccgtgcgacatatcacgacaactgagggtc
agtcacggatgcgtcagcaagatcctgggcaggtactatgaaactggcagtataaagccc
ggagtgatcggtggctccaaaccgaaggtggccacaccgaaagtggtggataaaatagcg
gactataagagacacaaccccaccatgttcgcgtgggagatccgggaccggctgctggcg
gagggcatctgcgacaacgacaccgtgcccagcgtctcctccatcaacaggattattcgc
actaaagttcaacaacagtaccacccctctcctgatggaacatctctctcgacaccagga
cacactatagttcccagcacagcgtcccctccagtatcaagtggatccagtgatccagtg
ggttcatactctatcaatggtattctgggcatccctcgttccaatggagagaagaggaaa
agagatgacgatggttcagagggttcagggcagaacagtgactcccagggcagtgtggaa
agccttaggaaacatctacgtgctgatgcctttacccaacaacagctggaggccttggat
cgagtgtttgagcgaccagcctaccctgatgtctttcacaacacggagcacatcaaacca
gagcaggctagtgagtatgcccttcctgcactgaacccaggactggatgaggttaaacct
agcctgtcgtccagcagctcctcagacctgggtgccagcgtgtcccaaagctaccctgta
ggtagagatatggctaacacaaccttacctggctatccacctcacgtcccccctacagga
cagggcagctacccaacatccacactggctggaatggttcctgggagcgaattttcaggg
aatccctacagccacccacagtatacagcatacaacgaggcctggcgcttcagcaaccca
gccttactgagttccccttattattatagtgcatcccgagcctctgcaccaccagctgct
gccgctgcttacgaccgccactag
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