Ictalurus punctatus (channel catfish): 108273601
Help
Entry
108273601 CDS
T04658
Symbol
zranb1a
Name
(RefSeq) ubiquitin thioesterase ZRANB1
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108273601 (zranb1a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108273601 (zranb1a)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108273601 (zranb1a)
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C64
108273601 (zranb1a)
Ubiquitin system [BR:
ipu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
108273601 (zranb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
108273601
NCBI-ProteinID:
XP_053541060
Ensembl:
ENSIPUG00000002479
UniProt:
A0A2D0S6P8
LinkDB
All DBs
Position
13:complement(27825217..27846971)
Genome browser
AA seq
637 aa
AA seq
DB search
MTDPHSKWACEYCTYENWPSAIKCTMCRAQRPSAAIIGEDLNEFKRNSVHGDDSGTSSLI
ICPDSSARPRVRPLRPSEPGSHASVSRPNEEYNDKNRLHAPRWSCTMCTYENWAETRSCA
VCEHPPPNDASPVITNEQEQAGWRTLRTRTSPPVSSDRDAPVHIQDLEVGAHGCDEDFKK
LKQIKNRMRKSNWMFLNACVGVVEGDLAAVEVYKSSGGDIARQLTSDEVRLLNRPSAFDT
GFTLVHLAIRFQRQDMLAILLTEVSQQAVKCIPAMVCPELTEQIRREIAASVHQRKGDFA
CYFLTDLVTFTLPADIEDLPPAVQEKLFDDLLDRDVQKELEEDDAVINWSLELGSRVDSR
LYALWNRTAGDCLLDSVLQATWGIYDKDSVLRNTLHDSLHHCSHWFYTRWKEWESWYSQS
FGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGE
TLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMEADGYDNRGAGANLNTDDD
VTVTFLPLVDSERKLLHIHFLSTHEMGNEEQQEKLLRDWMDCCVTDGGMLAAMQKSCRRR
SHPLVTQMVEKWLDGYRQLRPCPALSDGDEEEDEDDE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcctcattcgaaatgggcgtgcgagtactgcacgtacgagaactggccctcg
gctataaagtgcacgatgtgccgagctcagcgtcccagcgccgccatcatcggcgaggac
ctgaacgagttcaagaggaactccgtgcacggcgacgactcgggaaccagcagcctgatc
atctgccccgactccagcgccaggccccgggtgcgcccgctccgtccctccgagcccggc
agccacgcgtccgtgtcgcgccctaacgaggaatataacgataaaaaccgcctgcacgcg
ccgagatggagctgcaccatgtgcacctacgagaactgggcggagacgcggagctgcgcc
gtgtgcgagcacccgccgcctaacgacgcgtcgcccgtcatcactaacgagcaggagcag
gcaggatggaggacgctgaggacgaggacgtccccgcccgtctcctccgaccgggacgcg
cccgtccacattcaggacctcgaggtgggcgctcacggctgcgacgaggactttaaaaag
ctcaaacagatcaagaaccgaatgaggaagagcaactggatgtttctcaacgcctgtgtg
ggagtggtggagggtgacctggccgcagtggaggtgtataaatcgtcgggtggagacatc
gctcggcagctgacgtcggatgaagtgcgtctgttaaaccgtccctctgccttcgacacc
ggtttcacactcgtccacctggctatccgtttccagaggcaggacatgctcgctatcctc
ctcaccgaggtatcccagcaggcagtgaagtgtatcccagcgatggtgtgtcctgaactg
acggagcagatccggagagaaattgctgcctcggtacaccagcggaaaggagacttcgcc
tgttacttcctcactgacctcgtcaccttcactctaccagcagatattgaagatttgccc
cctgcagttcaggagaagctgtttgatgatctgcttgaccgagacgtacaaaaagagctg
gaggaggacgatgcggtgattaactggtctctggagctgggatctcgagtggacagtcgt
ctgtacgctctgtggaaccgaacggccggagactgtctgctcgactcggtgctgcaggcc
acgtggggcatctacgacaaggacagtgtcctccgcaacacactgcacgacagcctgcac
cactgctcacactggttctacactcggtggaaggaatgggagtcgtggtattcgcagagt
ttcgggctccatttctccctcagagaggagcagtggcaggaagactgggccttcatcctg
tccctcgccagccagcccggtgcgagtttggagcagacccacatatttgtcctcgcacac
atcctgcgtcggccgattatagtttacggagtgaagtattataagagtttccgtggcgag
acgctgggctacacccgctttcaaggtgtgtacctgccgttgctatgggaacagagcttt
tgctggaaaagccctatcgccctcggttacacgaggggtcacttttcagcgttggtcgcc
atggaggccgacggctacgacaatcgcggcgcgggcgccaacctcaacacggacgacgat
gtcaccgtgacgttcctcccgttggtcgacagcgagaggaagctgctgcacatccacttc
ctgtcaacgcacgagatggggaacgaggagcagcaggagaagctgctgcgagactggatg
gattgctgcgtgacggatggagggatgctcgccgccatgcagaagagctgccgaaggagg
agccatcctctcgtcactcagatggtggaaaaatggctggacggctaccgacagctccgc
ccatgccccgccctttcagacggagacgaagaggaggacgaggacgacgagtga
DBGET
integrated database retrieval system
