Ictalurus punctatus (channel catfish): 108273602
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Entry
108273602 CDS
T04658
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108273602
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108273602
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GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
ig
LRR_1
LRR_5
fn3
Ig_2
V-set
LRR_EndoS
LRR_6
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
108273602
NCBI-ProteinID:
XP_017338431
Ensembl:
ENSIPUG00000002111
LinkDB
All DBs
Position
13:28574078..28579886
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AA seq
558 aa
AA seq
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MFSTTLTALFLLHRFYSAVGFCVTGCSCTEDSAGRSLLCMQTALGSIPENLPGDLIKIRI
ENSHLTEIPERTFYTVSALESLWLNFNTITLMNIKSLEGLYNLTELRLEGNKLRTIPWMA
FQDTPKLKILDLKHNRLDVLPEFALRHLSSLTYLDLSFNQLTVISLDVFLNWPRYQVQKP
SRREDSDANVVLALHDNHWLCDCRLKGFVDFVKSVSPPIILMNSYLSCSGPKSKAGRFFH
DVELRNCLKPESSTPDANVTAVLGSNTTLRCFVKARPDAVVRWSYSLKAIRGFTVSQSQV
NEDTIISALIIPTVRSSDHGLYKCSASNFIGNSSVSIQLNILNSNVSFAMSPGFPLPSVN
ENIYIDIRIAKQTVYGITIEWYAVTENPSETWFTVHFGRYDSPKKEALYVGPGINKYTVS
DLEPATKYEVCVSLKNQSPRPEQCIVFVTGSSTNELEQRERLIHIIVIVCAMVLAVPAGM
FACTTNTRISCMDRCIQVCSRNREKRDAKDSQENDRQGTFDSLQTASDEGLCRDSGKEKK
WRRRSEDKVQKANSAQLY
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgttctccacaacgctaaccgcactgttccttttacatcggttctactcagccgtcggg
ttctgcgtgacgggatgctcctgcactgaagacagcgctggaagatctttattatgtatg
caaactgctttaggatcaattcctgagaacctccctggagatttgatcaaaatcagaatc
gagaattcgcacctcacagaaatccctgaaaggactttttacacagtcagtgccttggag
tcgctgtggctgaactttaacaccatcacgctgatgaacattaagagccttgaaggcctg
tataacctgactgaactccgactggaaggaaataaactcagaacgataccgtggatggcc
tttcaggacacgcccaaactcaaaatcctggatctgaagcacaaccggctggacgtgctg
ccggaattcgcgttacgccacctgtcctcactgacctatttagatttatccttcaatcag
cttacggtgatatccctggatgtttttctcaactggcctcgctatcaggtacaaaagccc
agcaggagggaggacagtgatgctaacgtcgtattagcgttgcatgataaccactggctg
tgcgactgccgactcaaaggctttgtcgactttgtcaaatccgtcagtccgcccatcatt
ttgatgaactcctacctgtcctgttcaggtccaaaatctaaagctgggaggttttttcat
gacgtcgagttgaggaattgtctgaagccggaaagttctacccctgacgctaacgtcacg
gcagtgctagggtccaacacgacgctgaggtgctttgtgaaggcgaggcctgatgcggtg
gttcgatggagctacagtctaaaagccatcagaggtttcacagtttctcagtcgcaggtg
aacgaggatacgatcatctcggctttaataatcccgacagtccgctcatccgatcacggc
ctctacaaatgcagcgccagcaacttcatcgggaattcctccgttagcatccagctcaac
atcttgaactccaacgtttcctttgcgatgtccccgggctttcctctaccctccgtcaac
gaaaacatttacatcgatatacgaatcgccaagcagaccgtgtacggtataaccatcgag
tggtatgcggtgacggagaatccctctgaaacgtggttcactgtccatttcggtcgctac
gattctccaaagaaagaggctctgtacgtcggcccaggcatcaacaagtacaccgtgagc
gaccttgaaccagccacaaagtacgaggtgtgcgtctcgctgaagaatcagtcgcctcgt
cctgagcagtgtattgttttcgtgacggggagcagcacgaacgaactggagcagcgtgaa
cgactcatccacattattgtgatcgtttgcgccatggtgctagcggttcctgcgggaatg
ttcgcctgcaccaccaacaccaggatcagctgcatggatcgctgcattcaggtctgcagc
aggaatcgggaaaagagagacgcaaaggactcgcaggaaaacgacaggcagggaacgttc
gacagtctccagacggccagcgacgaaggactctgcagagattcgggaaaagagaagaaa
tggagacggcgctcagaagacaaagtgcagaaggctaacagcgcacagctctactaa
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