Ictalurus punctatus (channel catfish): 108273611
Help
Entry
108273611 CDS
T04658
Name
(RefSeq) short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
KO
K09478
short-chain 2-methylacyl-CoA dehydrogenase [EC:
1.3.8.5
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00071
Fatty acid degradation
ipu00280
Valine, leucine and isoleucine degradation
ipu01100
Metabolic pathways
ipu01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
108273611
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
108273611
Enzymes [BR:
ipu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.5 short-chain 2-methylacyl-CoA dehydrogenase
108273611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
HpaB_N
Motif
Other DBs
NCBI-GeneID:
108273611
NCBI-ProteinID:
XP_053540986
Ensembl:
ENSIPUG00000002210
UniProt:
A0A9F7RPJ5
LinkDB
All DBs
Position
13:complement(28414880..28421696)
Genome browser
AA seq
419 aa
AA seq
DB search
MAAPLLRFFGKVSRQLTQPWCSCRPFLRHGSSPAAGFPPLQTYSEEEDMMREAVRKYAQE
RIAPFVSQMDENSTMDPEVIRSLFEQGLMGIEINPKYGGTGSSFFSSILVIEELAKVDPS
ISVLCDIQNTLINTLMVKLGTEEQKEKYLPRLASDMVGSFCLSEAGSGSDAFSLKTRAEK
RGGQYVINGSKMWISNAEYAGVFLVMANADPSAGYRGITCFIVDRDTEGLHIGKNENKLG
LRASSTCSLVFDNVTVGEKSVLGEVGQGYKYAIGMLNEGRIGIAAQMLGLAQGCFDHTVP
YTKQRVQFGKRIFDFQAMQHQISHVATQLEAARLLTYNAARLREAGRPFIKEACMAKYFS
SEVATLTTSKCIEWMGGVGFTKDYPIEKYYRDCKIGTIYEGTTNIQLSTIAKYIGQEYD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccttgctcaggttcttcggaaaggtgagcagacagctgacgcagccatgg
tgttcatgccggccgtttttgcgtcacggctcctctccagcagccggatttcctccttta
cagacgtactcagaggaggaggacatgatgagggaggcggtgaggaagtatgctcaggag
cgcattgctccgtttgtgtctcagatggatgaaaattctacgatggacccggaagtgatc
agatctctgtttgagcaggggttgatggggattgagataaacccaaagtacggcggtaca
ggctcctccttcttctcctccatcctagtgattgaggagctagcgaaggtggacccgtcc
atatcggtgctgtgtgacatccagaacacgttgatcaacactctgatggtcaaactgggc
accgaggagcagaaagagaaatacctccctcgcctcgcctccgacatggttgggagtttt
tgtttatccgaggctggctctgggagcgacgctttctctctgaagacgcgagcggagaag
cgcggaggtcaatacgtcattaacggatcaaagatgtggatcagcaacgcagagtacgcc
ggagtgtttctggtcatggctaatgcagacccctcagctggttacagagggatcacgtgc
ttcattgtggatcgggacactgaggggcttcacatcggcaagaacgagaacaaactgggg
ctgagagcctcgtctacctgctcactcgtcttcgataacgtcacggtgggtgagaagagc
gtcctgggtgaagtgggtcagggatataaatacgccatcgggatgctgaatgaagggagg
atcggtatcgcagcacagatgctgggtttagctcagggctgtttcgatcacaccgttccc
tacaccaagcagagggtccagttcggaaaacgcatctttgacttccaggcgatgcagcat
cagatttctcacgtggcgactcagctggaagcggcgaggctgctcacttataacgcggcg
aggctgagggaggcggggcgacccttcattaaagaggcctgcatggccaagtacttctcc
tcagaggtggcgacgttaaccacgtcgaagtgtatcgagtggatgggaggcgtcggcttc
accaaggactatcctatagagaaatactacagagactgtaagataggaaccatctatgag
ggaacgaccaacatacagctgagcacaatagcaaagtacatcgggcaggagtacgactga
DBGET
integrated database retrieval system
