Ictalurus punctatus (channel catfish): 108273681
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Entry
108273681 CDS
T04658
Name
(RefSeq) uncharacterized protein LOC108273681
KO
K05149
tumor necrosis factor receptor superfamily member 12A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108273681
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ipu04050
]
108273681
04090 CD molecules [BR:
ipu04090
]
108273681
Cytokine receptors [BR:
ipu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108273681
CD molecules [BR:
ipu04090
]
Proteins
108273681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
stn_TNFRSF12A
SP_C-Propep
DUF347
DUF6215
Amastin
C2orf92
Pox_A14
MHC2-interact
NRG4_TM
Motif
Other DBs
NCBI-GeneID:
108273681
NCBI-ProteinID:
XP_047015327
UniProt:
A0A979F5S0
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Position
13:14420542..14425705
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AA seq
120 aa
AA seq
DB search
MDIDAVFRAVCLVLVAGTHLSGTNAEKSSSCAKSEFFNSDLGGCVPCNTCIEYPKTPSCN
ACPPVQPHDSWRVAAITSFSVLAAVVVFGALLIGVLVLQCRSKRTLSDPIEETTGPLYPV
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgacgctgttttccgtgccgtctgcctggttctcgtggctggaacccattta
agtggaacaaacgcggaaaaaagttcctcctgtgcaaagtcagagttctttaacagcgat
cttggtggttgtgtgccttgcaatacatgcatagagtaccccaaaaccccatcatgtaac
gcatgcccaccggtccagcctcatgattcctggagggtagcagccattaccagtttctca
gtgctggcagcggtggttgttttcggagccttgctcataggagtgctagtacttcaatgc
aggtccaaaaggactttaagtgaccccatcgaggaaaccacaggtccactttatccagtg
tag
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