Ictalurus punctatus (channel catfish): 108273701
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Entry
108273701 CDS
T04658
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108273701 (zeb1b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
108273701 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_15
Homeodomain
zf-C2H2_6
Zn_SUZ12
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
108273701
NCBI-ProteinID:
XP_017338586
Ensembl:
ENSIPUG00000011262
UniProt:
W5U8T9
LinkDB
All DBs
Position
13:18044016..18113803
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AA seq
1100 aa
AA seq
DB search
MADGPRCKRRKQANPKRTSVSNYSNVLEGQSDSDDEDKLHIVEEDATPMDGADGESVAHD
DDANGPDDRWDEVKEECVSEEDERSRDALVEEMLQQGDTAVIFPEAPEDEPRQGTPETSG
HDENGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSLCSYTFSHRTQLD
RHMSAHKAGRDQRHVTQTGGGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCK
KRFSHSGSYSSHISSKKCIGLISVNGRPRPSPTTGGTKTPQCPSPSLPSSPATARTQIRD
KLDHSKPLQEQLPITQIKSEPLDYEYKPVVVAPAAPGGVNGVFQGGAAAPLQGAVQAVVL
PTVGLVSPISINLGDLQNMLKVAVDGNVIRQVLENAQAKGQPANTGRVAIAQAPQQVIQA
ISLPIVDQDGTTKIIINYSLDPSQAQAALQNLKKEPVGQNTDSCKAERLPEDLTVKSKTT
RDKTTITVDEEWQQEKGKLYNHTTDKHCVKEEQEVNGTHLEEKSEDADGLCPGQPPLKNL
MSLLKAYFALNAEPTKEALAKISESVNLPTDIVRKWFEKMQNGQIPMEISTATPQKEQSN
GIDINGTPEETQKSVSEQDSKRNQEEEEEMELRSPAEGTTAGISGAENGPTSPLPLNLSA
DGPVPAQTAEEGEGPLDLSLPKSVAAANTTSAHSVYSAQDEPLNLVCTKKEVLSNASTST
AIYASQTSANPLNIVTTQLPTLVAITKQGPGQCLRTLTTTKQTILIPQLAYTYTTTASSP
AGGDTPQKAILQVNGVKEEKQEAGSEAASVLEEQTDSDSGPVRKKMKKTDNGLYACDLCD
KIFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFS
HSGSYSQHMNHRYSYCKKEAHGQNLVQRDEEEENPNEEQAGAASTTASPPSQVDSDERGS
SAREDEESEEEDVMGSGSMVDEDEIQVVRIGEEGGEDEEDTGEQYRMEEMDTGNEEAVRE
NGGHEEDTVESQEEGEEDGEMMKVVVMQDDEGDEEEQTEITEAMDMQENIGEEKAEDEGE
NVNEEGGNEGTTPSENGDVK
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccaaagaggacgagcgtg
agtaactacagcaatgtactggaaggccagtcagactctgatgatgaagataagctccat
atcgtggaggaagatgcaacccccatggatggagctgacggtgagagtgttgcccatgat
gatgacgccaacggccctgacgaccgatgggatgaagtgaaagaagaatgtgtgtcagag
gaggatgagagaagtagggatgctcttgttgaggaaatgcttcagcagggagacactgcc
gtcatcttcccagaggcaccagaagatgaaccacgccaaggaacaccggagaccagcggc
catgatgagaatggcacaccagacgcgttttctcagctcctcacctgtccctactgctcc
cgcggctacaagcgctacacgtctctgaaggagcacataaagtatagacacgagaagagc
gaggacaacttcagctgctcactttgcagctacactttctcccaccgtacacagctcgac
cgacacatgagcgcacacaaagcaggcagagaccagcggcatgtaacccaaacagggggt
ggaggaaaccgtaagtttaagtgcactgaatgtggcaaagctttcaagtacaaacaccac
ctgaaagaacacctgcgtatccacagtggagagaagccatacgagtgccccaactgtaaa
aagcgtttctctcactccggctcctacagttcccatatcagcagcaagaaatgcattggc
ctcatttccgtcaatggccgacctcgaccctcgccaaccacaggaggcaccaaaacccct
cagtgtccttcaccatccctgccctcctcccctgccactgcccggactcagatccgggac
aaactggaccatagtaaacccctgcaggagcagctccctatcacacagattaagtctgag
ccattggactatgagtacaagcctgtggtagttgccccagctgcccctggaggagtaaat
ggggttttccaaggaggggcagcagcacccctacagggagcagttcaggctgtggtcctc
cccactgtaggactggtctccccaatcagcattaatctaggggacttgcagaacatgctg
aaggtggcagtggatgggaatgtgatcaggcaggtgttggagaatgcccaggccaaaggc
cagcctgcaaacactggcagagtggctattgcacaggctcctcagcaagtcatccaagcc
atcagtcttcccattgttgaccaggatggtaccaccaagatcataatcaactacagcctt
gacccctcgcaggctcaggcagctctgcagaacttgaagaaagagccggtgggccagaat
acagactcctgcaaggctgaacgactacctgaggacctgacggttaaaagcaagacaacc
agggacaaaaccaccatcactgtggatgaagagtggcagcaagagaagggcaaactctac
aatcacacaacagacaaacactgtgtcaaggaggaacaggaggttaatggaacacacttg
gaggagaagtctgaagatgctgacggactgtgtcctgggcagcccccattgaagaacctt
atgtccttgcttaaggcttactttgccttaaacgcagaacccaccaaggaagcgctggca
aagatatcagagtcagtcaatctccctaccgatattgtcaggaagtggtttgagaagatg
cagaatgggcagattccaatggagatctccacagccacaccccagaaagaacagtctaat
ggaatagacattaatggcactccagaggaaacccaaaagtcggtgtcagagcaggacagc
aaaaggaaccaagaggaggaagaggagatggagcttcgtagcccagcagagggcactaca
gctgggataagtggagcagaaaatggccccacatcccctttaccactaaatctatctgca
gatgggcctgtgccagcccagacagcagaggaaggagagggacctcttgatttgtctctc
ccaaaatctgtagcagcagcaaatacaaccagcgctcactctgtttactcagctcaggac
gagcctctaaacttggtttgcacaaagaaggaagtgctcagcaatgcaagcaccagcact
gccatctatgccagccaaacaagtgccaatcccctgaacattgtgaccactcaactgccc
accctggtggctatcaccaagcaaggccctgggcagtgtctgcgtaccctcaccaccact
aaacagaccatcttaatcccacagctagcctacacctacaccactacagcctccagccca
gcagggggtgacacaccacagaaggccatactgcaagtcaacggtgttaaggaggagaaa
caggaggctggttcagaggcagcctctgtgctggaggagcaaacagactcagactccggg
ccggtgaggaagaagatgaagaagactgacaatggcttatatgcctgtgacctgtgtgac
aaaatcttccagaagagcagctcgctgcttcggcataaatacgaacacacaggtaaacgt
cctcatgaatgcgggatctgcagcaaagctttcaaacacaagcaccacctgatcgagcac
ctgcgtctgcactcgggagaaaagccgtaccagtgtgacaagtgtggcaagcgcttctct
cactccggctcctactcgcagcacatgaaccaccgctactcatactgtaagaaggaggca
cacggccagaaccttgtgcagagggacgaagaggaggagaaccccaacgaagagcaggct
ggagcagcaagcaccaccgcctcgcccccgtctcaggtggactcggatgaacgaggaagc
agtgccagagaggacgaggagagcgaggaggaagacgtgatgggctcggggagcatggtg
gacgaggacgaaattcaggtggtgaggatcggcgaggaaggaggagaggatgaggaagac
accggagagcagtacaggatggaggagatggacacaggaaatgaggaggcggttagggag
aatggaggacatgaggaggatacagtggaaagtcaagaagagggagaagaagatggagag
atgatgaaagtcgttgtgatgcaggatgatgagggagatgaagaagagcagacggaaatc
acagaagcgatggacatgcaggaaaacataggagaggaaaaagccgaggatgaaggagaa
aatgtgaatgaggagggtggaaatgaaggaaccacacccagtgaaaatggagatgtgaaa
tga
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integrated database retrieval system
