Ictalurus punctatus (channel catfish): 108273719
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Entry
108273719 CDS
T04658
Symbol
chmp6b
Name
(RefSeq) charged multivesicular body protein 6
KO
K12195
charged multivesicular body protein 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03250
Viral life cycle - HIV-1
ipu04144
Endocytosis
ipu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108273719 (chmp6b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108273719 (chmp6b)
09143 Cell growth and death
04217 Necroptosis
108273719 (chmp6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108273719 (chmp6b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108273719 (chmp6b)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
108273719 (chmp6b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108273719 (chmp6b)
Exosomal proteins of other body fluids (saliva and urine)
108273719 (chmp6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
108273719
NCBI-ProteinID:
XP_017338642
Ensembl:
ENSIPUG00000006694
UniProt:
W5UJ67
LinkDB
All DBs
Position
13:complement(21454419..21464582)
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AA seq
204 aa
AA seq
DB search
MGNIFGKKKRSRVTEQDRAVLQLKQQRDKLKQYQKRITLQLGKERQLAKQLLHDGKKEKA
LLLLKKKRFQEQLLDKTENQISNLERMVQDIEFAQIEMKVIEGLKVGNDCLKKMHEMMSI
EDVERIMDETQECIEYQKQIDDILAGSLTQEDEDAVLAELEAITQGDVELPEVPDEQLPE
IPDQEPERKKEIVKKKPERELLAL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatatttttggcaaaaagaaacgaagtcgagtcacagaacaggacagagctgtt
ttgcaactgaagcagcagagagataaactgaagcaatatcagaagaggatcactctacag
ctggggaaggagagacagttggccaagcagctgctgcatgatggcaagaaggagaaagct
ctcctgttgcttaagaaaaaacgcttccaggaacaacttctggacaagacggagaaccag
ataagcaacctagagcgcatggttcaagacattgagtttgcacagatcgagatgaaggtg
attgaaggactgaaggttggcaatgactgcttaaagaaaatgcatgagatgatgtccata
gaagacgtggagaggatcatggatgagacccaggaatgcattgagtaccagaagcaaatt
gatgacattctggcaggctctctgacacaagaggacgaggatgctgtattagcagagctg
gaggctatcactcagggagatgttgagcttcctgaggtgcctgatgagcaattaccagag
attccagatcaagagccagagcggaagaaggaaattgtgaagaagaagccggagagagag
ctgttggctttgtag
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