Ictalurus punctatus (channel catfish): 108273720
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Entry
108273720 CDS
T04658
Name
(RefSeq) nebulin-related-anchoring protein isoform X1
KO
K24421
nebulin-related-anchoring protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108273720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108273720
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
LIM domain-containing proteins
LASP family proteins
108273720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nebulin
LIM
Motif
Other DBs
NCBI-GeneID:
108273720
NCBI-ProteinID:
XP_017338643
Ensembl:
ENSIPUG00000016844
UniProt:
A0A2D0S7B7
LinkDB
All DBs
Position
13:15261207..15276493
Genome browser
AA seq
1829 aa
AA seq
DB search
MNIQNCARCGFVVYPAEKVNLIGQNWHKTCFHCEVCKMVLTANNYISHQKRPYCQVHNPK
NNTFTSVYETPVNINAKKQAQAVSEIKYREDGERFMSTFHYDMSKEIEQARKASQMTSQG
YESEFSEQQVWYSGSVSSQEVVRMSQAQKIISDVEYKRGHEERVTQFTSVTDTPEMLHAK
TGTSLASDVKYTEGYEQSKGKGSFPAMLTPAYEVAKKSNTLASNVEYKKGHEERVSKYTT
VIDTPEVLLAKSQGKIASDVVYMEEYEQQRGKGSFPAHFTPGYQVAKKANEMASKVKYQQ
KYEQEIKGKASTDAGAAEFTLAKENAEKFSQHAYTEEYEQQRGKGSFPAMITPGYQMAKK
ANDMASDLKYKKDLNKMKGSASAYHCLTSDDNLALKNACKINKLVSEVEYKKDHENTKGH
SINYCETPQFKNVSKIAQYTSDNKYKEKYANHMKGHYEGTGLDKKTLHAMKVRNLASDIA
YKSEYEQEHGEYNYPAEITPSYQTQKKLEPLKDKNYRQHIDKLKYSQVTDTPDIVQARIN
AQQFSNLNYKANYEKTKTQYTSAQDTPQLKTAKANAELISDIKYKEDWEKSKSKACDIGV
DTLTFKAAKASRDLASDIKYKELFTKNKDKAIGMNVSDSKTLHCLQVAKLNNEIAYKKDS
KEIQTKCNLPMNMVNLNHAKKAQALASDLDYRKKLHDYTILPDDIKVQQAKKAYNLQSDN
QYRADLIWMKGVGWEADGCLDVAQAKKAVELASDQKYRQKVDSVKFTQAADTLSIKHAKK
SQELQSDLAYKAGTEQIIHKYTASKDEPLYRQAKANAELLSDKTYKSSWEAQRDKGFELR
MDALSIFTAKANRDLASDVKYKKQYEMTKGKMIGVKTVTDDSQLAHSTLATKLHSDRNYR
KEYEDSKTKHSSSLDMMTISHAKKAQDLATETNYRTFLHKYTSLPSDMKVEWAKKAYGQQ
SDKKYRSDLNWMKGVGWETTGSLDVQQAKKAGNIISEKKYRQNVSALKFTSVEDTPEMVQ
AKVSNKLALDRLYREKGENEKHTYTITGDLPEHMQAKINAMNLSETCYKESWTKLRDAGY
QLRLDAIPFQAAKSSGDILSDQKYKEQFEKSKGKMIGLKGLQDDINIAHSVNATQLQSNI
KYKKDSTKGHSQFHLSMDMLDVVHAKKAQALVSDQDYRLTLHHYTALPDDLKVQAAKRAY
KLQSEKAYRSDMNYLRGAAWIATGALQIEGSKRATELISEKKYRQQPYAFKHTSVTDSPD
IVHAKFSNKITNERLYKEKGENLRHNYTITAERPEITQARINAANFSDIKYKESWHTLRA
QGYKLTMQDIPFQAAKASTGIASDYMYKHNHALEKGKHIGARSIMDDSHLLHCWQMARLQ
SDKDYRKDVMSTSGQYHLGLDLINLVHAKKAQALASDQDYKKRFHSYTVLPNDMKVQWAK
KAYELQSQNLYKSDLNFMKGVAWDSVGAPQMESARKAGELISDKKYRQLPGHLKFTQVAD
SPDIVHAKNSYMQCSERLYKSGDSESMHKYTLLPDHPDFIRAKINAQQISDKVYKASGDQ
VKSAGYDFRLDAIPFQTAKASREIASDLHYKEAFVKQKGQQIGLLSVEDDPKMRHSLAVG
KLQSNNEYKKKFQETRSQFKIHADQPEFLHARKSQAQASDITYRQHLHNYTCDPQQLNFQ
HAKQAYKLQSDVNYKSDLNWIKGVGWTPPGSHKVEMARRAAELGLAEGLDTEQAISKYQE
LMMLQRQLQLENQQHSSSEQVDTTEQVQQSAVNPDAMEILQVKRKKTIHTTFKQAKTTKS
MTMQSVTSNSSTNQSLTNQSSEKKFITNK
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcagaactgtgccaggtgtggatttgtggtatatccagctgaaaaagttaat
ctcattggccagaactggcacaaaacatgctttcactgtgaggtctgtaagatggttctc
actgccaataattatataagtcaccaaaagaggccatattgtcaagtacataatcctaag
aacaacaccttcacaagtgtctatgaaaccccagtcaacattaatgccaagaagcaggca
caggctgtcagtgagattaaatatagagaggatggtgaacgtttcatgtccactttccac
tatgacatgtccaaagagatagaacaggctcgcaaggccagccaaatgaccagccagggc
tatgaatctgaattttcagagcagcaggtatggtactcggggagtgtaagcagccaggag
gtagttcgcatgtctcaggcgcagaaaatcatcagtgatgtggagtacaagcgtggccat
gaggagcgagtgacacagttcacatctgtaactgacacacctgagatgctgcatgctaag
actggaacctcactggcaagcgatgtgaaatacactgagggatatgagcaatccaaagga
aaaggcagcttccctgctatgctcactccagcatacgaagtagccaagaaatccaacacc
cttgcgagcaatgtcgagtataagaagggacatgaggagagggtttcaaagtacaccact
gtgatagatacacctgaggtgctactggctaaaagtcaaggaaagatcgctagtgatgtt
gtctacatggaggaatatgaacagcaacgggggaaaggaagcttccctgcacactttact
cctggttaccaagtggccaagaaagcaaatgaaatggctagcaaagtgaagtaccagcag
aagtatgaacaagagataaagggtaaagctagcactgacgctggagcagctgagttcact
ctggctaaagagaatgcagaaaagttcagccagcatgcctatactgaggaatatgagcag
cagagaggcaagggaagctttcctgctatgatcactcctggataccagatggccaagaaa
gccaatgacatggccagtgatctgaaatataagaaggacctgaacaaaatgaagggctct
gcctctgcgtaccactgcctgacctctgatgataacctggctctgaagaatgcctgcaag
atcaacaagctcgtcagtgaggttgaatacaagaaagatcatgaaaacacaaaaggacac
agcatcaactattgtgagacaccacagtttaaaaatgtgtccaagattgcccagtatacc
agtgataataaatataaggagaagtatgccaatcacatgaagggtcactatgaaggaact
gggcttgacaagaaaactctgcatgccatgaaagtcagaaacctggccagtgatattgct
tataagtcagagtatgaacaggagcatggtgaatacaactaccctgctgaaatcacccca
tcttatcagacccagaagaaactggagcctctcaaagataaaaattacagacagcacatt
gacaagctgaaatacagtcaggtgacagatactcctgacattgttcaagctcgaatcaac
gcacagcaatttagcaatttgaactacaaagccaactatgagaaaactaagacccagtat
acctcagctcaagatacaccacagcttaagacagccaaagccaatgcagagctcattagt
gatatcaagtataaagaggactgggagaagagtaagtctaaagcatgtgacattggtgtg
gacacactgacctttaaagctgctaaagcttcaagagatctggccagtgatattaaatat
aaagagttattcacaaagaacaaggacaaagcaattggtatgaatgtaagtgattctaag
actctccactgtcttcaagtggccaagttgaacaatgagattgcctataagaaggactca
aaggagattcagaccaagtgtaacctgcctatgaacatggtgaatctaaaccatgcgaaa
aaggcccaggcactggccagtgatctagactataggaagaagcttcatgactacaccatc
ctgcctgatgacatcaaagtgcagcaagctaagaaggcctacaacctgcagagtgataac
cagtaccgcgctgatctgatctggatgaagggagtgggctgggaggctgatggctgcctg
gatgttgcacaggccaagaaagctgtagagcttgcaagcgaccaaaaatatcgtcaaaag
gtggacagtgtgaagtttacccaagcagctgacactttatccatcaagcatgccaagaag
agccaggaactacagagtgatctggcatacaaggcaggcacagaacagatcatccataag
tacactgcgagcaaggatgaaccactctacagacaggccaaagctaatgcagagcttctc
agtgataaaacttataagagtagttgggaggcccagagggacaagggctttgagttacgc
atggatgcactgtcaatctttaccgccaaagctaacagggaccttgccagtgatgtcaaa
tacaagaaacagtatgagatgacgaaaggaaagatgattggggtgaagactgtgacagat
gattctcagttggcccactccacactggccactaaactccacagtgaccgcaactatagg
aaagagtatgaagacagtaagaccaaacacagttcatcacttgatatgatgaccatcagt
catgccaaaaaggcccaagacctggctacagagaccaactacagaactttcctgcacaag
tacacaagcctgcccagtgatatgaaagtagaatgggcgaagaaagcgtatggccaacag
agcgataaaaagtatcggtcagatctgaactggatgaagggtgttggctgggagactact
gggtctcttgatgtacagcaggctaagaaggctggaaatatcatcagtgagaaaaaatat
cgtcagaatgtgagtgctctgaaattcaccagtgtggaggatacaccagagatggtacag
gccaaagtcagcaacaaactggcactagataggttgtacagagaaaagggagagaatgag
aagcacacttacacaatcacaggagacctacctgagcatatgcaggccaagataaatgct
atgaatctcagtgagacatgctacaaagaatcatggacaaagctcagagatgcaggctac
caattacgtttggatgctattcctttccaggcagccaaatcctctggagatatacttagt
gatcaaaaatacaaagagcagtttgagaagtcaaagggtaagatgattggcctgaaagga
ttgcaggatgacattaacattgcccactcagtgaatgccacccagctccagagtaatatt
aaatataagaaagactctactaaaggacactctcagttccacctctcaatggacatgtta
gacgtagttcatgctaagaaggcccaggctctggttagtgaccaagactacagacttacc
ctgcaccattacaccgctctgcctgatgacctgaaggtgcaagctgccaagagagcttat
aagctgcagagtgagaaagcataccgctctgatatgaattacctgcgtggggctgcctgg
attgctactggtgccttacagattgaaggctccaaacgtgcaacagagctgatcagtgag
aaaaaatatcgacagcagccatatgcatttaagcatacatctgttacagattcccctgac
attgttcatgccaagttcagcaacaagatcaccaatgagcgactatacaaagagaaaggc
gagaacctcaggcataactacaccatcacagctgaacgaccagagatcacccaggccaga
attaacgctgctaatttcagcgatatcaagtacaaagagtcctggcacacgctgagagca
cagggatataaactgacaatgcaggacatccccttccaggcagccaaagcatccacaggc
attgccagcgattacatgtacaagcacaatcatgctctggagaagggcaagcacattgga
gcacggagcattatggacgattctcacctcctacactgctggcagatggcacgtctgcag
agtgacaaggactaccgtaaagatgtcatgtccaccagtgggcagtatcaccttggacta
gacctgatcaacctggttcatgccaagaaagctcaggccctggccagtgaccaggactac
aagaaacgcttccattcctacactgtattgcctaatgacatgaaggtgcagtgggcaaag
aaggcttatgagctgcagagccagaacttgtacaaatcagatctaaacttcatgaaagga
gtggcctgggactcagttggtgcacctcagatggagtctgcaagaaaagctggagagcta
atcagtgataagaaatatcgccagcttcctggccatctgaagtttacccaagtggctgat
tcccctgatattgtccatgccaagaacagttacatgcagtgtagtgagagattgtacaag
tctggcgattctgagtccatgcacaaatacaccctgctcccagatcaccctgacttcatc
cgagcaaagatcaatgcacagcagatcagcgataaagtttataaggcatcaggagaccag
gtgaagtcagcaggctatgacttcagactagatgctatccccttccagacagccaaagcc
tctagagaaattgccagtgatttgcactacaaggaggcctttgtaaaacagaagggtcag
cagataggtctcctgagtgtcgaggatgaccccaagatgagacattcactggctgtaggc
aagctgcagagtaacaatgagtacaagaagaagttccaggagacacgatctcaatttaag
atccatgcagaccagccagagttcctgcatgctaggaagagccaggctcaggccagtgac
atcacataccgccaacatctccataactacacgtgcgacccacagcagctgaacttccaa
cacgctaaacaggcctacaagctgcagagtgatgtgaactataaatctgacctgaactgg
ataaaaggggtgggctggactccaccaggctctcataaggtagagatggccaggagagct
gccgagcttggcctggctgagggactggacactgagcaagccatctccaaatatcaagaa
ttgatgatgctccagcgtcagctacagttggagaatcagcagcacagctcctcagagcag
gtggacaccacagagcaagtccagcagtctgcagtcaatccagatgccatggagatcctt
caagtcaaaaggaagaagaccatccacactactttcaaacaggcaaaaactacaaagtcc
atgacaatgcagtctgtaacatctaactcatctacaaaccagtcactcaccaaccagtcc
tctgagaagaaattcatcacaaataagtga
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integrated database retrieval system
