Ictalurus punctatus (channel catfish): 108273721
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Entry
108273721 CDS
T04658
Name
(RefSeq) dynamin-binding protein isoform X1
KO
K20705
dynamin-binding protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108273721
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108273721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
RhoGEF
BAR
Motif
Other DBs
NCBI-GeneID:
108273721
NCBI-ProteinID:
XP_017338646
Ensembl:
ENSIPUG00000016749
UniProt:
A0A2D0S884
LinkDB
All DBs
Position
13:complement(15294391..15334533)
Genome browser
AA seq
1673 aa
AA seq
DB search
MEAGSVVRAVFEFLPSVSEELPLFAGDVVEVLSVVDEFWLLGIKDGVSGQFPSTFVESVT
VPPTKAGEQLYVCISDFNSSEPDSLPLKRGDVVAGEGNVDAGWHRGRNAWGSRGLFPLSC
MKELELSGRSRQLSERSAAAQDSELPPYALGQGRALMSLHAQLDEELDFREGDIITIVGM
PEPGWFQGELEGRTGIFPEGFVELLAPLRSLQSAKPISLGQEHYPPCRVDEEEEKEAEEE
EERVKDIVEMQTQEEHEEEAGVYGIALYEFRALEPGELDFDVGDRIQILRTLEDGWLEGQ
LRGRRGIFPHRFVKMEEHLEEQVPSVSEKNGTSDKEEGDSYASEYSCGQEDQALLAHDQD
RRSHEDYTVWDLDYFERREECREPCLRDTQSEICQDRTTVQRLPPNQPGPRRQERPPPPL
VHPSTPGNSGSRPLQRTNSGNLIPPRPQLPPRPCLRNRQISTSNHSSPPEPPPVPSTRNT
SLNRPNRISSSLQSNSSWTRNKGYYASHDSRNPFNSRRSDSQAKSRQKKLTRHASISDAD
LGTYGHDEHNIWSQEKGTNGLPTSHTLGSLSGDLEAKLTQQLLEFEKSLPGSCTESEEQS
MKNSQSRDMFSRHFSIMDYSNESDIIKGSYHYLPHDSPSSSPNSSLERRKTRRPPPPRPR
ILRPPAPRSSHGHSSLSNGQVPQQPHRPIRQAPRPPPPCPRPPVQPSNLLVSTEDEEGTQ
EEKVEEAEDALERERDIEQEREREQEQYRLLLRLEEVERDIDMYTHTAHELSAMLEDEGE
EDEVAHQQALENLEFCNYTVETLTLEKQQLQEMTLLSAQPKSLEPVPASAATTEDPEQRM
LEKRSKVIAELLQTERDYIKDLNMCKTEIILPLQRKQAQNVDFDGLFGNIDSVIDLSTRL
EEALQDTDSIGKVFLDFKSELEEVYKVYCQNHDDAIALLESYEKDENIQKQVLECLENLR
TIYHGWGKTNYINLGSFLIKPVQRVMRYPLLLMELLNATPESHHDRKQLADAMSSIKEIN
VNINEYKRRKDLVVKYRKGDEDRLIDKISKLSMHSIIKKSNRVSSHLKHLTGMAPQLKDE
AFDEAEKRFRLQERLIKSFIRDISLYLQHIRESASVKVLSAISFCDIYTERQQQLGPERF
QRAHRCISDKQFTEFKERTEALVISPLTQLLSMFAGPHKLIQKRFDKLLDYNNCKERAER
LKDKRVQEELQAARNNYEALNAQLLDELPKFLRAAEELFTNCMQGFAQAQRDFMFLTLGE
LTPLLQLSGIGGTEGNLVSLFQEEHSRVLQLLQSFSFFPENLPMPRKAYEKKTLEKQTPK
KQLLSPPNCIMQTDQHRTGLLALYGPEKLFQAERNFNAAQDLDVSILEGDIVGVIKQQDP
MGSQNRWLIDNGVTKGFVYSSFLKPYNPRQSHSDVSIESHSSIESGYGGSSPVFSRQNSN
STLTFNHETSTVSFSSGHTQNHATLRPSQDSDVSHRIPHIDTPSPSYFPTNQRDTLDSTY
RNSSNQKELSETAVRNAANHRDYSEPLYQNPTNYRDSSDSSHTTPTNHRDPSDSSETDSC
SSNKSSRHDASQRHTAYSSQQRQNGEYSVQKRRPQYSADEYIEPDHELDGHQIYYALYSF
NARCANELSISANQRVRILEFQDMNGNQEWWLGEAGGRRGYVPSNYIRKSEYT
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaggctctgtggtgcgtgccgtgtttgagttcctgcccagtgtctcagaggag
cttcctctctttgccggtgatgttgttgaagtccttagcgtagtggatgagttttggttg
ctcgggatcaaagatggagtctcaggtcagtttcctagcacctttgttgaatctgtcact
gttccccctacgaaagcaggagagcaactctatgtgtgtatcagtgacttcaactcctct
gagccagacagcctgcccctgaagagaggtgatgtggtggctggagagggcaatgtagac
gcaggttggcacaggggtcggaatgcctggggctcacgtggactttttcccttatcatgt
atgaaggagctggagctatcaggccgctctaggcagctgagtgagcgcagtgcggctgcc
caggattctgagttgcctccttatgctcttggccagggtcgtgctctcatgagcctgcac
gcccagctggatgaagagcttgactttcgtgaaggtgacatcatcactatagtgggtatg
cctgagccaggttggttccagggtgagctggaaggtaggacaggaatctttcctgagggt
tttgtagagctgcttgcacctctgcgctcactccagtctgccaagcctatcagcctcggt
caggagcactatcccccctgcagagtggatgaagaggaggaaaaggaggctgaagaagaa
gaggagagagtgaaggacattgtagaaatgcagacccaggaagaacatgaagaggaagct
ggtgtgtatggaatcgccctgtatgagttccgagctctggagcctggggagctagacttt
gatgttggagacaggatacaaatactcagaacactagaggatggctggcttgaggggcag
ttgcggggcagaaggggaattttcccccaccgctttgttaagatggaggaacatttagag
gaacaagtgccatctgtaagtgaaaaaaacggcacctctgacaaagaggaaggggacagt
tatgcttctgagtatagttgtggtcaagaagaccaagctttactggcacatgatcaggat
agaagaagccatgaggactacactgtgtgggatctggactactttgagagaagagaagaa
tgcagagagccttgtttgagagacacacagtcagaaatctgtcaggacagaacaaccgtt
cagaggctgcctcctaatcagccaggtcccaggagacaagagaggccaccaccaccactt
gtccatcccagtacacctggcaattcaggctccaggccactccagagaactaattcagga
aatctgattccacccagaccacagctgcctcctcgtccctgcctccgcaacaggcagatc
agcaccagcaatcacagcagccctcctgaaccaccacctgttcccagcaccaggaacact
agccttaaccgacctaatagaatctcttcaagtcttcagagcaattcctcctggaccagg
aacaaaggctactacgcctcccatgacagcagaaaccccttcaacagcagaagatcagac
agtcaagcgaagagcagacagaagaagttgacccgccatgcaagtatcagtgatgctgac
cttggaacttatgggcatgatgagcataatatatggtctcaggagaagggcactaatggg
ctgccgacctctcacacattaggctctttgtctggtgacctggaagccaagctgacccag
cagctgctggagtttgagaagagccttccaggcagttgtacagaaagtgaggaacagtcc
atgaaaaacagtcaatctagagacatgttttcccgccacttttctatcatggactacagt
aacgagagtgacatcatcaaaggctcttaccactacttgccccatgattcaccatcctct
agccccaactcctctctagaaagacggaaaacacggcgcccccctcctcctcgtcccagg
attcttagaccaccagcacctcgtagttctcatggtcactcttctcttagcaatggtcaa
gttcctcaacagccccacaggccaattcgacaagctccacggccacctccaccttgtccc
cgaccacctgtgcagccctccaacctcttggtctcaacagaggatgaggagggtacacag
gaggaaaaggttgaggaggctgaagatgctctagagagggagagagacattgagcaagag
agggaaagagagcaggaacagtacagacttctccttagacttgaggaagttgaaagagac
attgacatgtacacacacacagcacatgagttaagtgccatgctagaagacgagggagag
gaggatgaagtggcccatcagcaggccttggagaatctggagttctgcaactacactgtg
gagacactgacactggagaagcagcagttgcaagagatgacgctactgtcggcccagcct
aaatctctagaaccagttccagcctctgcagccaccactgaggatcctgagcaaaggatg
ctagagaaaaggtcaaaggtcatagcagagctcctgcagactgagagagattacatcaaa
gacctgaacatgtgtaagacagaaatcatcctacccctacagagaaaacaggcccagaat
gtagactttgatgggctctttggcaacatcgactctgtaattgatctctccacacgtctt
gaagaagcacttcaggacactgactcgataggaaaagtgttcctggacttcaaatcagaa
ctggaggaggtgtacaaggtctattgtcagaatcacgatgatgccatcgccttgctggag
tcctatgagaaagatgaaaatattcagaaacaggtgctggagtgcctggagaacctcaga
acgatataccatgggtgggggaagactaactacataaacctgggttcatttctgataaag
cctgtgcagagggtgatgcgttatccactgctgctcatggagcttttgaatgccacacca
gagtcgcaccatgatagaaagcagcttgcagatgcaatgtcatccatcaaagaaatcaac
gtcaacatcaatgagtacaaaagaagaaaggacctggtggtaaagtaccggaaaggagac
gaggacagactcattgacaagatctccaaactaagcatgcactctatcatcaagaagtca
aacagagtgagcagtcaccttaagcacctgactggaatggcaccacagctcaaagatgaa
gcatttgatgaggcagagaagcgattcagactccaggagagattaatcaagtcctttatc
agggatatctctctttatttgcaacacatacgggagtcagcctctgtgaaggtgctgtca
gccatcagcttctgtgatatctacacagagcgccaacagcagctgggtcctgagcgcttc
cagagagcccatcgatgcatcagtgacaagcagttcactgaatttaaggagaggacagag
gctctggtcatctctcccctcacccagctgctttccatgtttgctggtccacacaagctg
atccagaagcgatttgacaagctgcttgactacaataactgtaaggagcgagcagagagg
ttgaaagacaagcgtgtacaggaagagctgcaagcagcgaggaataactatgaggccctg
aatgcccagctgctggatgagcttcccaaatttcttcgtgctgctgaggagctcttcacc
aactgtatgcaaggctttgcccaggcacagagagacttcatgtttctcacactgggagag
ctcactccactcctgcagctgtccggtataggaggcacggaagggaacctggtgtcactg
tttcaggaagaacacagccgagtgctccagcttttacagagcttcagcttcttcccagag
aacctgcccatgccacgcaaagcctacgaaaagaaaaccctggagaaacagactcccaag
aagcagcttctaagccctccaaactgcataatgcagacagatcagcatcgcacagggtta
cttgctctctacggcccagagaaacttttccaggctgaaaggaattttaatgctgcacag
gacctcgatgtgtccatactggagggggacatagtgggagtcatcaaacaacaagacccc
atgggcagtcagaatcgctggctaatagataatggcgtcacaaagggctttgtttacagc
tccttcttaaagccctataatccacgacagagccattcagatgtttctattgagagtcac
tcttccattgagtcaggatatggtggctcctcccctgtgttctcacggcaaaacagcaac
agcacactgacattcaaccatgagacatctaccgtcagcttctcttcgggccacactcaa
aaccatgcaacgctacgcccgtctcaggactctgacgtctcccacaggattccccacatc
gatactccatcaccaagctattttcccaccaatcagagggatacccttgactccacctac
cggaattcctccaatcagaaagaactgtctgagactgctgttcgtaatgctgccaatcac
agggattattctgagcctttgtaccaaaatcccaccaattacagagattcctctgactcc
agtcacactacaccaactaatcatagagacccctccgactcttcagagacagactcttgt
tcctccaataagagctctagacatgatgcatctcagaggcacacagcctacagctctcag
cagagacagaacggcgagtattcagtgcagaaaaggaggcctcagtactctgctgatgag
tatatagagcctgaccatgagctggatgggcatcagatatattatgctctttattcattc
aatgcacgctgtgcaaatgagctgagcatttcggcaaatcagagagttcgaatcctagag
ttccaagatatgaatggcaaccaggagtggtggctgggtgaggctggaggacggcggggc
tatgtaccttccaactacatccgcaagtccgagtacacctga
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integrated database retrieval system
