Ictalurus punctatus (channel catfish): 108273746
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Entry
108273746 CDS
T04658
Symbol
msl1b
Name
(RefSeq) male-specific lethal 1 homolog
KO
K13163
male-specific lethal 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108273746 (msl1b)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108273746 (msl1b)
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
108273746 (msl1b)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MSL complex
108273746 (msl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEHE
MSL1_dimer
DUF7791
DUF3287
Herpes_UL6
Motif
Other DBs
NCBI-GeneID:
108273746
NCBI-ProteinID:
XP_017338707
Ensembl:
ENSIPUG00000019670
UniProt:
W5U7Z8
LinkDB
All DBs
Position
13:13333112..13336753
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AA seq
523 aa
AA seq
DB search
MNMRTESISNVGLRSESKSFYLSKGHTIGVPRNSHTLLTETHDSVGITLKDAGQRFVKSR
NLAKDLGGKAARPLLPVGQNKAGASGTSSESTNKSASQTKPMGGEGTPIKSKTPLGQTSA
TDNKADFVSMNSHNSRDSGGEDSTKGFETMGAHGVASHEHTEGKRNNMRKTSSHPSSQAN
CLHQLLLLQLDLIEQQQQQLQSKDKEIDELKADRDTLLARIERMERRLQLMSKEPRDKRL
FQPLERWVPDTDDFWDSDVGDSPQTPTPKTPFSRSSKVQKRKCGFLDSKIQRSQGKSSRL
TPQKSDTRAASPCQRELRNKETPETAPGRSSGLTETTADAEESCENEDLPYMTTTEMYLC
CWHQPPVSPLCEVSPKKEDDVAIPSWRENSIEPLRDNDALDFSENLEDGVFLKRHSKLEL
DEKRRKRWDIQRIREQRMLQRLQQRMEKRKLNIQESEPEISSFYPDSDDVESVVITPFLP
VVAFGRPLPKLTPQNFELPWLDERSRCRIENQKKQTPHRTCRK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcggactgagtccatctcaaacgtgggattgcgctccgaatcgaagagtttt
tacttgtcaaaaggacacacgattggtgtcccgagaaattcccacaccttgctgacagaa
acgcatgactctgttggtatcactctcaaggacgcggggcagcgttttgttaaatcaaga
aacctggccaaggatctcggtgggaaagcggctcggcctttattgccggtgggacaaaac
aaagctggtgcttctgggaccagctctgagagcacaaacaaatcagcgtctcaaaccaaa
ccaatggggggcgaaggaacccctattaaaagcaaaactccacttggacaaaccagtgct
actgataataaagcagattttgtttcaatgaattcccacaattccagagattctggtggc
gaggacagcacaaaggggtttgaaactatgggggctcacggcgtggcatcacacgaacac
acagaaggtaaacgaaacaacatgaggaagacctcaagccatcccagttcacaagccaac
tgtcttcatcagctacttttgcttcagctggacctgatcgagcaacagcagcagcagctg
cagtctaaggacaaggagatagatgagttaaaagcagacagagacacgcttcttgcacgg
atcgagaggatggaacggcgtttacagttgatgagtaaggaaccacgtgataagcgtctc
tttcagcctttagagagatgggtcccagacactgatgacttttgggattcagatgtagga
gacagccctcagacccccacacctaaaaccccctttagtcgaagtagcaaagtgcaaaag
aggaaatgtggcttcttggattccaaaatacagaggtcacagggcaagtcttcaaggtta
accccccagaagtctgacactcgtgcagcctcaccatgtcagagggagctgcgaaacaaa
gagacccctgagacagcaccggggaggtcatcgggcctgacagaaacaacagcagatgca
gaagagagctgtgaaaatgaagaccttccatacatgacgacaacagaaatgtacctgtgc
tgctggcaccaacctcctgtctcccccctctgtgaggtatcccccaagaaagaggacgat
gttgccattccatcctggcgggaaaatagcatcgagcctttgagggacaatgatgcttta
gatttttcagagaatcttgaggatggggtgtttctgaaacgccactccaagctggagctg
gatgagaagagaaggaaaaggtgggacattcagaggatacgggagcagcgtatgcttcaa
cggctgcagcagcgcatggaaaaaagaaaactaaatattcaggagagtgaaccagagatt
tcttcattttaccctgattctgatgatgtggagtcagttgttataacaccttttctgcca
gttgtggcctttggtcgtcctttacccaagctgactccacagaattttgagctgccgtgg
cttgatgaaagaagtcggtgccgtatagaaaatcagaaaaaacaaactcctcataggacc
tgtcggaaataa
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