Ictalurus punctatus (channel catfish): 108273782
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Entry
108273782 CDS
T04658
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108273782 (vps35l)
Membrane trafficking [BR:
ipu04131
]
Protein recycling
Others
Retriever complex
108273782 (vps35l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
108273782
NCBI-ProteinID:
XP_017338794
Ensembl:
ENSIPUG00000022010
UniProt:
A0A2D0S7S1
LinkDB
All DBs
Position
13:complement(542315..550774)
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AA seq
991 aa
AA seq
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MIGDLTQFFTQLPGWSHDTDSKMASVQWHSRTRSYDAESRSCRAPAVSVQSGDYHPLKPI
TVTDSKSRRGARKGSTSSSSSSSCSSVAPDPLSSMLEGTDPLSLFAAAASSSANETPALS
HSSSSLELGRKRREKDEEVGCDFEPWSAKRGEILARFTTTEKLSINLFMGSEKSKATSPS
SAVSEKVRTRLEELDDLEEGSQRELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIV
IQCSKLLSDTSVILFYPSKFVLITDILDTFGRLVYERIWSMCSDPAPLPDPFSVEDVNDT
AKETCLNWFFKIASIRELIPRLYVEAAILKCNRFVNKRGIQETLPRLTAMIRGIGDPLVG
VYARAYLCRVGMEVAPQLKDSLNKNFFDLLASFRQIHGDSVQNQLVIQRVEIPVYLTLYS
PAIHWILQCVAYRAPDVLLTEMMERCKKLGNNALLLNSIMWAFRAEFVAARATDFIGMIK
ECDEAGFPKHLLFGSLGRSLACADPPEGERLPVLNEAWKVITKVRSPQDYITCAEIWVEF
TCRHFTKREVNTVLADIIKHMTPDRAFEDAYPQLQSVMTKILTYFHNFSVLFSMEKFLPF
LDMFQKDSVRVEVCKSIMDVFIKHQQEATRDPVILNALLHVCKTMHDSVNALTVEDEKRA
LALLINGFVRMVSFGRDFEQQLSFCVEARATFCNLEPVVVQLIHTVNHLSMETRRVMGGN
HSRKTAAFVRACAAYSFITIPSLGSIFSRLHLYLLSGQVALANQCLSQADSFLKAAVSIL
PEVPRVISVEGKQRSSEPFLLDFINNFLSTLLVVPDHPEQGVLYLVRGLLNMVQDYTWED
NSDAKVRVYVSALPLLAAMSQESYLYTIPKVDSNETLYGGDPKFIAEISRVCDTLIGQVL
DYLKTLGQDEGARRQGSLAFSLFSCLLAHGDLRNNKLNQLAVNLWNLSHKNGYCDTRASV
RTLEHIRQQAQQPDMAHLSDMLLRLSLQSRA
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgataggcgatcttacccagttctttacacaacttccgggttggtcacatgacactgac
tccaagatggcttccgttcagtggcattcccgcacgcgcagctacgacgcggagtcgcgg
agctgccgtgctccggccgtgtcggtccagagcggcgattaccatccgcttaaacccatt
acagtgacggattccaagtcccggcgcggagcacggaaaggcagcacgtcctcgtcgtca
tcgtcttcctgtagctctgtcgctcctgaccctctgagctccatgctggaaggcacggac
cctctgtccctcttcgccgccgccgcctcgtcctcggccaacgaaactcctgcgctgtct
cacagcagctcttccttggagctcgggaggaagcggagggaaaaagatgaggaagtgggc
tgcgactttgagccgtggtccgcgaaacggggcgagatcctggccaggttcacgaccacc
gagaagctctccataaatctcttcatgggctctgagaaaagtaaagccaccagccccagc
tctgcagtctcagagaaagtgcgcactcgtctggaggagttagacgacctggaggaaggc
tctcagagggagctgctgaacctctctcagcaggattacgtgaaccggatcgaggaactg
aatcagtccctaaaggaagcttgggcttcggaccagaaggtcaaagcgctcaaaatcgtc
atccagtgctccaagctgctttcggacacgtccgtcatcctgttctaccccagcaagttc
gtcctcatcaccgacatcctggacactttcggtcgtctggtgtacgaaagaatctggtcc
atgtgctcggatcccgctccgcttccagacccgttctccgtggaggatgtgaacgacacg
gccaaagagacgtgcctcaactggttcttcaaaatcgcctccatcagagagctcatccct
cgcctgtacgtggaggccgctatactgaagtgcaaccggttcgtgaacaagcgcgggatc
caggagactctcccgcggctcacggcgatgatccgaggcatcggagaccctttagtcggc
gtgtacgctcgagcctacctgtgcagggtgggcatggaggtggcgccgcagctcaaggac
agcctgaacaagaacttcttcgacctcctggcgtccttcagacagattcacggcgacagc
gttcagaaccagctggtcatccagagggtggagattcccgtctacctcacgctgtattct
cctgccatccactggatcctgcagtgtgtggcctaccgagcacccgatgtgctgctgaca
gaaatgatggagaggtgcaagaagctgggcaacaacgcgctcctgctgaactccatcatg
tgggctttccgggccgagttcgtcgctgccagagccaccgattttatcggtatgatcaag
gagtgtgacgaggccgggtttcccaagcacctgctcttcggttctctgggccgtagtttg
gcctgcgccgaccctcccgagggcgagaggttgcccgtccttaacgaggcctggaaggtc
atcacaaaagtgcgcagcccgcaggactacatcacctgtgctgaaatctgggtggagttc
acctgccgtcacttcactaaacgagaggtgaacaccgtgctggccgacatcatcaagcac
atgacgcccgaccgtgcgttcgaggacgcttatccgcagttgcagtcggtgatgacgaag
atcctcacgtactttcacaacttctccgtcctcttctccatggagaagttcctacccttc
ttggacatgttccagaaagacagcgtgcgagtggaagtctgtaaatccatcatggacgtc
ttcatcaaacaccagcaggaggcgacccgcgatcccgtcatccttaacgctctgctgcac
gtctgcaaaaccatgcacgactccgtcaacgctctcacggtggaggatgagaaacgagct
ctagctctgctgatcaacggtttcgtccgcatggtgtctttcggccgggacttcgagcag
cagctgagtttctgcgtggaggccagagccacgttctgcaacttggagccggtcgtcgtt
cagctcattcacacggtgaaccatttgtccatggagacgagacgagtgatgggcgggaac
cactcgcgcaaaacggccgcgttcgtccgggcgtgcgcagcgtacagtttcatcaccatt
ccgtctctcgggagcatcttcagccgcctccatctctacctgctttcaggacaggtggcg
ttggccaatcagtgtctctcccaagccgattcgtttctgaaggcagcggtcagtattttg
cccgaggtgccacgtgtcattagcgtcgagggtaaacagcgttcctctgaaccctttctc
ctcgacttcatcaacaacttcctgtccacactgctggtggtgccggaccaccctgagcag
ggcgtgttgtacttggtgagaggattgttgaacatggtgcaggattacacgtgggaggac
aacagcgacgctaaagtgcgtgtgtacgtcagcgcgttaccgctgctggctgccatgagt
caggagagctatctctacaccattcctaaagtggactcgaacgagacgctgtacggcggc
gaccccaagtttatagccgagatcagtcgagtgtgtgacactctgattggccaggtgctg
gattacctgaagactctgggtcaggacgagggagcacgccggcagggatctctcgctttc
tctctcttcagctgtttgttggctcacggagatctgcgcaacaacaaactcaaccaactc
gccgttaatctgtggaacctgagccataagaacggctactgcgatacacgcgcctcggtg
cgcacactggagcacatcaggcagcaggcccagcagcccgacatggctcacctctccgac
atgctcctgcggctctccttgcagtcacgagcctga
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