Ictalurus punctatus (channel catfish): 108273807
Help
Entry
108273807 CDS
T04658
Symbol
si:ch211-217a12.1
Name
(RefSeq) alanine aminotransferase 2-like
KO
K00814
alanine transaminase [EC:
2.6.1.2
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00220
Arginine biosynthesis
ipu00250
Alanine, aspartate and glutamate metabolism
ipu01100
Metabolic pathways
ipu01200
Carbon metabolism
ipu01210
2-Oxocarboxylic acid metabolism
ipu01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
108273807 (si:ch211-217a12.1)
00220 Arginine biosynthesis
108273807 (si:ch211-217a12.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ipu01007
]
108273807 (si:ch211-217a12.1)
Enzymes [BR:
ipu01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.2 alanine transaminase
108273807 (si:ch211-217a12.1)
Amino acid related enzymes [BR:
ipu01007
]
Aminotransferase (transaminase)
Class I
108273807 (si:ch211-217a12.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
108273807
NCBI-ProteinID:
XP_017338855
Ensembl:
ENSIPUG00000021481
UniProt:
W5UEJ1
LinkDB
All DBs
Position
13:complement(944194..954683)
Genome browser
AA seq
489 aa
AA seq
DB search
MMTDHVAVRGVKVLTVDTMNPNVKKVEYAVRGPIVQRAAQIETELQQGVKKPFTEVIRAN
IGDCHAMGQKPITFFRQVLAVCSYPDLLGDDRFPEDVKSRARRILQACCGGSLGSYSSSQ
GIELVRQDVARYIEKRDGGIKCNPDNIYLTAGASDGIVTMLKLLISGEGSSRTGVMISIP
QYPLYSAALAELAAVQINYYLDEETCWSLDVRELRRALEEARKHCTPRALCIINPGNPTG
QVQSRQCIEDVIRFAAEESLFLMADEVYQDNVYADGCAFHSFKKVLFEMGPEYSGRVELA
SFHSTSKCYMGECGFRGGYMEVVNLDPAVKVQLMKLVSVRLCPPVTGQALLDLVVNPPEP
HEPSYDTFIKERSHTLSELAKKASMTQQILNQVPGMTCNPVQGAMYTFPRIHIPPKAVSA
AQENGQAPDMFYCMKMLEEMGICLVPGSGFGQKDGTYHFRMTILPPTEKLKIVLEKIKEF
HLSFTRQYE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatgacggaccatgttgcggttcgcggcgtgaaggtgttgacggtagacaccatgaac
ccgaatgtgaagaaggtggagtacgcggtgcgagggcccatagtgcagagagctgcgcag
atcgaaacggagcttcagcagggagtaaagaagcccttcactgaagtgattagggcgaat
atcggagactgccacgccatggggcagaaacccatcacctttttcaggcaggtgctggcc
gtctgctcgtatcccgatcttctaggtgacgacaggtttccagaagacgtgaaaagtcga
gcacgacggatccttcaggcctgctgcggagggagtctgggatcttacagcagcagtcag
gggatcgagctcgttcgacaggacgtggcgcgatacatcgagaagagagacggagggatc
aaatgcaatccagacaacatctacctcaccgctggagccagtgatggcattgtgacgatg
ctgaagctgctgatctcaggtgaaggatcttctcggaccggagtgatgatctctatccct
cagtacccgctgtactccgccgctctcgccgagctcgccgccgtgcagataaattattat
ctggacgaggaaacgtgctggagtttggacgtccgagagctgcggcgtgcgctggaggag
gcgaggaaacactgcacacctcgtgccctgtgtatcatcaaccccggaaacccgaccggt
caggtgcagagccgccagtgcatcgaggacgtgatccgattcgccgctgaagaaagtctc
tttctgatggcagatgaggtctaccaggacaacgtgtacgcagatggctgtgcgtttcac
tcgttcaagaaggtgctgtttgagatgggtccggagtactcgggccgagtggagctggcc
tcgtttcattccacctcaaagtgctatatgggagagtgtgggtttcggggtggctacatg
gaggtggtgaatttggaccctgcggtcaaagttcagctgatgaagctggtctcggtgcgc
ttgtgtcctcctgtaactggacaggctttactggacctggtggtgaatcctcctgaaccg
cacgaaccctcatacgacaccttcattaaggagcgctcacacactctctccgaattagca
aagaaagctagcatgacacagcagattctcaatcaggtgccggggatgacatgtaacccg
gtccagggagccatgtacaccttccctcgcatccacatcccgcctaaagccgtgtctgca
gctcaggagaacggtcaggctccggacatgttctactgcatgaagatgctcgaggagatg
ggcatctgcctcgtaccaggaagtggattcggtcagaaagacggaacgtaccatttcagg
atgacgatccttcctccgactgagaaactgaaaatagttttggagaagataaaggagttt
catctgagtttcacgcggcagtatgaataa
DBGET
integrated database retrieval system