Ictalurus punctatus (channel catfish): 108273815
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Entry
108273815 CDS
T04658
Symbol
arhgap23b
Name
(RefSeq) rho GTPase-activating protein 23 isoform X3
KO
K20315
Rho GTPase-activating protein 21/23
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108273815 (arhgap23b)
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Others
Others
108273815 (arhgap23b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108273815 (arhgap23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PDZ
PH_9
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
108273815
NCBI-ProteinID:
XP_017338869
Ensembl:
ENSIPUG00000004340
UniProt:
A0A2D0S7Z6
LinkDB
All DBs
Position
13:11277092..11314910
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AA seq
1480 aa
AA seq
DB search
MNGVAFCLVGIPPVSQSEAKGPRDGALLSNENARPVSREGVAWKGPRTVVLQKNSQGFGF
TLRHFIVYPPESALHTSVKDVENGNGKGNHKGRLEPMDTIFVKSVKEMGPAHQAGLCTGD
RLVKVNGESILGKTYSQVIALIQNSKSVLELSIMPKDEDVLQLVSAYSQDAYLKGNLPYS
GGAQNLPEPPPIFYPRSKPTSSGMPGNLNCRRGSAGLIDSRSMGDSTGGTGQRLDVPSRH
TLRNQRARSSTIAISPLDFHFANHSAAITSASLPYQRKGSLPLSQSELCHQALAKWYHSQ
TERPGMSHHHRSISQDTLLCHYGTAMGVNQSPYIDSCWMGRWGMTGAHQSNLSCSENLLP
AYAEYDSHGRSLEKLDKAVALVSPRFEKLACAPQSGQPVRKEEQPCLTNQHAVICADVPP
LGRGFSHAQDQTGSHSYHSAQPRCLPTQTVDDQMVGYRSYSPSFCRKAGHLMQQAHSFKD
SSYTGPHLSWTTPKTSPPDSAPSSGRDSSPLSMSSTAETQNSAKESSDSGPTVEEPVHAQ
MQEVVLRQKPPYAKCTPHAMRHPNYAVPVDLLEPPVASAPARSNGNLQTLPVEQDSLASI
PFIDEPTSPSVDLLAQHVPASSVVSSSLCQAPILSSSPVPPPLTSPLTHLLDTDCSTVKN
SRRSSYLLAITTERSKSCDEGLNTFRDEGRVFMRLPKRVKSFFTEGSLESLRVAEEARSK
RHSTSELGNITLTDIRKEGWLHYKQILTEKGKKVGGGMRPWKRVFSVLRSHSLFMYKDKR
EAVLHGAGSLGHGGGGGGGGEDEQPISIRGCLIDIAYSETKRKHTLRLTTQDFCEYLLQA
EDRDDMLSWIRIIRENSKTDNEELGFSRQALISKKLNDYRKQSLTGTKPDTSPRVHRMMQ
PFLLSKTDSSSGVNRSLKTESKEESSPPKATWSINIMKKGKKAGPKAFGVRLEDCPPGAN
NKFVPLIVETCCNLVEEMGLEYTGIYRVPGNNAMVSTLQDQLNKGMEINTAEERWQDLNV
ISSLLKSFFRKLPEPLFTDDKYNDFIYANRLEDAGDRLKTMRKLIRDLPDHCYHTLKFLI
SHLKRVADHSAKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLILHHAWF
FTDELMDKDEKTPEDQRDEQPIPNIDHLLSNIGRTAPLGDASDSTNSDSAKSKGSTISKK
DVSAKDFLPLSIISAVTRKRKKHRSACPTDSSSDEDSEHEPVKASNYGELSENVGNETDG
GHEESKIGCAAQSTGSQTTEVDEKDVEGKRMMEAHEGGEQEVEGRESTGSQQEDDGIRVD
VSVRAQLGQEQPQRPRSFLYSHQNSPAQSVTDQSTSSPSSPCTSDAHRLSQVNSASRKKL
RGERARPRSLYEEPGLERAVGLARVKASLVRGQERLRQAMSPSRDPSVQPSWLSQVHANF
LSSANDLWRSGTQRRHASPETRRRRRDWRRHTVVGNSGES
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttgccttctgccttgttggaataccaccagtctctcaaagtgaagcaaaa
gggccaagagatggagctctgttgtccaatgagaatgcacgtccagtgtccagggaaggt
gtggcgtggaagggccctcgtacagtggtcctgcagaagaactctcagggctttgggttt
acattgcggcatttcatagtgtacccaccagaatctgccctccacacctctgtgaaggat
gtagagaacggcaatggaaaagggaatcataagggtcgcctggagccaatggatactatt
tttgtgaagagcgttaaagagatgggtcctgcccaccaggctgggctctgcacaggagac
cgactagtaaaagtaaatggagagagtattctggggaaaacctactctcaggttatagca
ctaatccaaaacagtaagagtgtgctggagctttccattatgcctaaagatgaggatgta
ctccagttggtaagtgcatactctcaagatgcttatctgaaagggaatctaccatacagc
ggaggggctcaaaaccttccagagcctcctccaatcttctaccctcgcagcaaacccacc
tcctccggtatgcctggcaacctgaactgcaggcgtgggtcagctggtctcatagacagc
cgctccatgggtgacagtactgggggtacaggccaacgcttagatgtcccaagccgccat
acacttcgtaaccagcgtgctcgctcctcaaccatagccatcagccctctggattttcac
tttgccaaccacagtgcggccatcacctcagcctcactgccctaccaacggaagggcagc
cttccactgtcgcagagtgagctgtgtcaccaggccctggctaaatggtaccacagccag
acagagcgcccaggcatgtcccaccaccaccgcagcatctctcaggacacactgctatgc
cactatgggacagccatgggagtcaaccagtccccttacatagactcgtgttggatgggt
agatggggtatgactggggcgcatcaatcaaacctctcctgctcagaaaatctactgcct
gcttatgctgaatacgatagccatgggcgctcgctagagaaattggacaaggccgttgca
ttggtttcacctcgttttgagaagttggcttgtgccccacagagcggtcagccagtcaga
aaagaagagcagccctgcctgaccaatcaacatgcagtaatttgtgcagatgtgccaccc
ctgggccggggattcagccatgcccaggatcagacaggctctcattcttatcattcagcc
cagcccagatgtttgcccacacagacagtagatgaccagatggtgggctaccgcagctat
agtccctctttctgtcgcaaagcaggccacctcatgcagcaggctcactcttttaaagat
tcctcctacactggtcctcacctcagctggaccacgcctaaaactagtcccccagatagt
gcaccgtcttcaggcagagattcgtcccctctgtccatgtcttccactgctgagacgcag
aactctgcaaaggaaagctcagatagtggaccaacagtggaggagcctgttcatgcacag
atgcaagaggtagtcctcagacaaaagcctccctatgccaaatgtaccccccacgcaatg
cgccacccaaactatgctgtgcctgtggatctactcgaacctcctgttgcctcggctcct
gcgcggtccaatggtaacctgcaaaccctgcctgtggagcaggactccctggcttccatt
ccctttatagatgagcccaccagccccagtgtagacctgcttgcccagcacgtgcccgcc
tcctctgtggtgtccagcagcctatgccaggcacctatcctgtccagcagccctgtccct
cccccccttacctcccctctcacccatctcctcgacacagactgcagcactgtcaagaac
agccgtcgctcttcctacctgctggccatcacaactgagcgctccaagtcttgtgatgag
ggtctgaacacattcagagatgaaggccgtgtgtttatgagattaccaaaaagagtcaaa
agcttttttacagagggttccctcgagagtctgcgagtggcagaggaagcgcgctccaaa
cgccactccacctctgagcttggcaacatcacactaacggatatcagaaaagagggctgg
ctgcactacaaacagatccttacagagaagggcaagaaagttggtggtggtatgaggcca
tggaaacgggtcttctctgtgctgcgctcccattcactctttatgtacaaggacaagcgt
gaggcagtgctccatggagctgggtcattaggccatggtggtggtggtggtggtggtggt
gaggatgagcagcccatcagtatccgtggctgcttgattgacatagcttacagcgagacg
aagcggaaacacacactacgactcaccacacaggacttctgtgagtacttgctccaggca
gaggaccgggacgacatgttgagctggatccgcatcatccgtgagaacagcaagactgac
aacgaggagcttggtttttccagacaggccctcatcagtaagaaactaaatgattacagg
aaacaaagcctaacaggtactaagccagacacttctcccagagtccacaggatgatgcaa
ccgtttctcctctcaaagacggacagcagctcaggagtgaaccgatccctaaagacagag
agcaaagaggagagcagtccccctaaggctacatggagtatcaacattatgaaaaaagga
aagaaagcaggtcctaaggcctttggggttagacttgaggactgccctccgggagccaat
aataagtttgtgcctctgatagtggaaacctgctgcaacctggtggaagagatgggtttg
gaatatacagggatctacagagtgccagggaacaatgccatggtgtccaccctacaggac
caactcaacaagggcatggagatcaacactgctgaagagagatggcaggacctgaatgta
atcagcagtctccttaagtctttctttaggaagcttccagaacctcttttcactgatgac
aaatacaatgatttcatctatgccaatcgattagaggacgctggagaccggttgaagaca
atgagaaaactgatccgtgacttgcctgatcattgctaccacacacttaaatttttgatc
agccatcttaagcgagtggctgatcactcagcgaagaataagatggagcccagaaacctt
gctcttgtgtttggtcccacgcttgtgcgtacctcagaggacaatatgacggacatggtc
actcacatgcctgaccgctataagattgtggagactctcattttgcatcatgcctggttc
ttcactgacgagctgatggataaagatgagaagacccctgaagaccaacgggacgagcag
cccattccaaatatcgaccacctcctctccaacattggtcgaacagcgccactgggggac
gcctcagattccactaacagcgattcagctaaatccaagggatctacgatttcaaagaaa
gatgtgagcgccaaggatttccttcccctgtccatcatatctgccgtgacccggaagagg
aagaagcatcggagtgcctgccctacagacagcagtagcgatgaggactccgagcacgag
cctgtgaaagccagtaactatggagagctgagcgagaatgtggggaatgagacggatgga
ggtcatgaggagagtaagatagggtgtgcggcgcaaagcacaggaagtcagacgacagaa
gtagatgaaaaggatgtagaaggaaaacggatgatggaagcacacgagggaggagaacag
gaggtagaagggagggagagtacaggtagccagcaagaggacgatggtatacgagtggat
gtcagcgtgagggcacagttagggcaagagcagccacagcggcctcgcagcttcctctat
tcccaccagaattctccagcgcagagcgtcacagaccagtcaaccagctctccctcatcc
ccctgcaccagcgatgcccacagactcagccaggtcaactcagcaagccgtaagaagctg
cgtggggagagggcacgccctcgatctttatatgaggaaccaggtctggagcgggctgtg
ggtcttgcccgagtcaaagcctcacttgtgcgcggccaagagaggctgcgtcaggccatg
tcccccagcagagacccctctgtccagccgagttggctgagtcaggtacatgccaacttc
ctttcctctgccaacgacttgtggaggtcagggactcagcggcgacatgcttccccagag
acgcgccgcagacggagagactggagacgccatacggtggtggggaatagtggggaaagc
taa
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