Ictalurus punctatus (channel catfish): 108273887 Help Entry 108273887         CDS       T04658                                  Name (RefSeq) DNA repair endonuclease XPF   KO K10848   DNA excision repair protein ERCC-4 [EC:3.1.-.-] Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03420   Nucleotide excision repair ipu03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     108273887    03460 Fanconi anemia pathway     108273887  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ipu03032]     108273887    03400 DNA repair and recombination proteins [BR:ipu03400]     108273887 DNA replication proteins [BR:ipu03032]  Eukaryotic type   DNA Replication Termination Factors    Other termination factors     108273887 DNA repair and recombination proteins [BR:ipu03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     Other NER factors      108273887 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ERCC4 Motif Other DBs NCBI-GeneID:  108273887 NCBI-ProteinID:  XP_017339020 Ensembl:  ENSIPUG00000001779 UniProt:  A0A2D0S9V4 LinkDB All DBs Position 13:complement(12639492..12647975) Genome browser AA seq 899 aa AA seqDB search MAGPLLEYETEMFLSLFSTDGLLIAAEGLGIDRILLHFMKVYSEEGSLVLLLNTTTPEQE FFTEQLRAEGVSHLPRTINSDVPSSERYHVYTQGGVLFVTSRILVVDFLTDRIPAHLISG ILVYRAHKIIESCQEAFILRLYRQKNKTGFIKAFTDKATSFSTGFCQVERVMRNLFVKKL FLWPRFQASVNSVLDRHKPDVVELHVHLTPVMRAIQSSILDIMNACLKELKRYNPTLEAE DLSLENTLGSAFEKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLL ESLRSSQKNFGSNSGWLFLDSSTSMFVNARSRVYRVPESKKKLKVGDVEEKPSVSVPLKR ELVLEKNPKWEALTEVLQEIEKELSSSEHEPGRVLICASDDRTCAQLKEYIQKGGDSLLM RLYSRTVGKDECVAVPEKTKQGNSRPRRDVRKGPKDKKDKNLARNTKLGAKKQRASLTLT QMVGQQKEAEVDQLGSSGDEREQDEMQEVKDEDVLLNLTSDSYYGVLQEPMTVIHPLKGC SDPYSLARVLKEVEPMFVVLYDAELSFVRQLEVYKASRPGKPLRVYFLIYGGSTEEQRYL TALRKEKQAFEHLIREKASMVVPEEREGRGDTNLDLDRSQEPAHAAADTRKAGGQEIVKE PCRVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTPEICVERKSVSDLIGSLQSGR LYAQCVSMSRFYRRPVLLIEFDPAKPFSLVARSELRQEISANDITSKLTLLTLHFPRLRL LWCPSPHATAQLFQELKHARPEPDAITAQAVTAESDVVEESVDLYNPGPYDFLLRMPGVN VKNVRGLIKHAASLAELLTLSLEKLGEILGSTSNARQLHEFLHNTMNVASVQKTKQTKY NT seq 2700 nt NT seq  +upstreamnt  +downstreamnt atggcgggaccgctgcttgagtacgagacggaaatgtttctgagccttttcagcacggat ggtttactgatcgcggcagaaggacttggtattgaccgcattttgttacactttatgaag gtttattcagaggaaggcagtctggtgctgctgctgaacacaacgactcctgaacaggag ttctttacagagcagctgagagctgaaggagtgagccatcttccccggaccataaacagt gatgtaccgagcagtgaacgctaccatgtttacacacaagggggagtgctgtttgtgacc agccgcatcctggtggtggattttctcaccgacagaattcctgctcacctcatctcagga atcctcgtctaccgtgctcataagatcattgagtcatgtcaagaggcttttatcttgaga ctgtaccgacaaaagaacaagaccggcttcatcaaagctttcacagacaaggcaacttct ttttctactggcttctgtcaagtcgagcgagttatgaggaatctctttgtgaagaagctc tttctctggcctaggttccaagcctccgtgaacagtgtgctggacaggcacaagcctgat gtggtagagctgcatgtgcatttgactccagtgatgagggccatccagagctccatcctg gacatcatgaatgcctgtttgaaggagcttaagcgttacaacccaactctggaggcagag gacctctcgctggagaatacactgggcagtgcctttgaaaaaaccattcgccattacctc gatcccttgtggcatcagctgggcgctaagaccaaatctctagtgcaggacctgaagatc ttacgaactctgttgctctacctcacgcagtacgactgcgtcactttcctcaatctgctc gagtccctgcgttccagccagaaaaactttggcagcaattcaggatggctgttcttggac tccagcacttccatgtttgtgaacgctcgtagccgtgtgtatcgcgttcctgagtcaaaa aagaagcttaaagttggtgacgtggaagaaaaaccaagtgtctctgtgcctttaaaaaga gagcttgtgcttgaaaagaatccgaagtgggaagctctgactgaggtgctgcaggagatt gaaaaggaattgagcagctccgagcacgaaccaggccgggtgttgatctgcgccagtgac gacaggacgtgtgctcagctgaaggagtacatccagaaaggtggtgattctttactcatg cgcctttattcacggactgtcggtaaagatgagtgtgtagcggtgcctgagaaaacaaaa caaggtaacagtcggcccagaagagacgtaagaaaaggacccaaggataagaaggacaag aatttggccagaaataccaaactcggcgcaaagaaacagcgagcttcactgacgctcaca caaatggtggggcagcagaaagaagctgaggtggaccagctgggcagcagtggagatgag agggaacaggatgaaatgcaggaggtaaaggatgaagatgttcttctaaatcttacttca gattcctactatggtgttctccaagaacccatgacggtcattcatccgctgaaaggatgc tcggatccgtacagtctagcgcgagtgttaaaagaggtcgagcccatgtttgtggtgctg tatgatgcggaactcagctttgtgcgccagctggaggtttacaaagccagcaggccaggc aaacctctcagggtgtatttccttatttatggtggttccacagaggaacagaggtatctc actgctctacgtaaagagaaacaagcatttgaacatctgatcagagaaaaggccagcatg gttgttccagaagagagagaaggccgaggagacacaaacctggacctggatcgtagtcag gaacctgctcacgctgctgcagacactcgcaaagcaggtggacaggaaattgtcaaagag ccgtgccgagtcatcgtagacatgcgggagttccgcagcgagcttccttccctcctgcac cggcgtgggctcgacatcgagccggtcaccctggaggtgggagactacatcctgactcct gaaatctgcgtggagcgcaagagcgtgagtgacctgatcggctcgctgcagagcggccgt ttgtacgctcagtgcgtgtccatgagccgcttctaccgccggcccgtgctgctcatcgaa ttcgacccggccaagccgttctcactcgtggcccgtagcgagctacgtcaggagatctcc gccaacgacatcacttccaaactgaccctcctgactctccatttcccccggctgaggctg ctctggtgcccatcaccccatgccaccgcgcagctctttcaggaactcaagcatgctcgg cctgagcctgatgccatcactgcccaggccgttacagcagaatcagatgtggtggaagaa tcggtagacctgtacaaccccgggccttatgacttcctgctccgtatgcccggagtgaat gttaaaaacgtaaggggactcattaaacatgctgccagcctggctgagctgctcactctg agcctggaaaagctgggtgagattctgggcagtactagtaatgccaggcagctccatgaa ttcctacacaataccatgaatgtggcttcagttcaaaagaccaaacaaacaaagtattag

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