KEGG   Ictalurus punctatus (channel catfish): 108273907
Entry
108273907         CDS       T04658                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108273907
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108273907
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108273907
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108273907
SSDB
Motif
Pfam: MMS19_N MMS19_C TOR1L1_N Sec7-like_HUS HEAT_Maestro PP4R3 CBM-like_CFAP184 Adaptin_N Cnd1
Other DBs
NCBI-GeneID: 108273907
NCBI-ProteinID: XP_017339073
Ensembl: ENSIPUG00000014011
UniProt: A0A2D0S8K2
LinkDB
Position
13:complement(5180484..5208801)
AA seq 1031 aa
MATDSSELLGLVEEFVSGKADSSAANIATGVKAGQFSILQLVDALGLSLTSSQTQTRSRG
VQLLSQVLQTCYSGLSESEVKVLVTFYENRLKDHYAITPHVLHGLTALAKCAVLPPGSAV
SILKALFQDVHVQSMMLTERACVYNILISLMDSREKELKGLGPDFVYGFVQAVDGERDPR
NLLLAFQIARNIIHRGYDLNQFTEELFEVTSCYFPIDFTPPPNDPHGIKQEDLILALRAV
LTGTPRFAEFLVPLLIEKLDSDVQNAKVDSLQTLAACAPVYGHKELAEFLPGLWSSIRRE
VFQTASERVESAGLSALSAITSCLSRIVLTSDSGDALQTFLELVLKDCQHHLCEPDLKLV
WPSAKLLQAASGASYRASLIVTAVVLPALFEQYNSRTQCAHRRTLLEVLQGFIQPTVSSQ
PAEQEDNVLFPFQKSLCNVVFSALAESNASLQVTATKVLATLGQQSGLLLETDVEIAVDH
LTRLVVEEDDVQVSLAVMECAGSLARLHPAVFAPRMVPRLKDEIFTEPMAEGDTSTHPHS
RSKAAAARERSVTALAYISSQLSVVQESAHVLLQVLSAAHKGSSSFSTEEVISVCRSLQR
IAEHAQHTVEIGDFFHKVVIPRLLGLSLHAALQSQKCSGHTSPLTEEAILSAIVPVISTA
CAALQPVPATQMAAQVVSLFLDGDVSCLPENAYPSQIQLLESQSDCWSQSQLVCLLMASV
CSLSQQVDIPDFDRLLVQLEELIFTCPHAFSYTSAAKCYAGLINKRAAGQALDAVLEKTL
KRISATLNCESSAQRVQAFTLLIWVVKALLLRYHPLLVNLTDKLFCLLSDDQLGSQAADS
FSLLMSDSPDVLNRSCHANVRIMYRQRFFTENSAKLVQGFNCAEQEKRSVFLKALSHIVN
NLPRQVQLSELPALLPLLLEALSCPDEAVQLSTLSCLQPLLMEPPPALTTQLEALFTRLL
ALTTSPAMKVRKSALCCVHALSRLPSHMVLPFRARVLRTLAKPLDDKKRLVRKEAVAARS
EWFLLGSPGGR
NT seq 3096 nt   +upstreamnt  +downstreamnt
atggctaccgatagtagtgaactgttaggtctggtggaggaatttgtctcgggaaaagct
gacagttcggctgcaaatatcgcgacaggtgtcaaggctggacagttctccatacttcag
ctggttgacgcactagggttaagtttaacaagctctcagactcagacacgcagccgaggg
gtgcagctcctctcgcaagtcctgcagacatgctacagcggcctttccgagagcgaagtg
aaggtcctggtaacgttctacgagaaccggctaaaagatcactatgctatcacgccacac
gttctgcacggactcaccgctctggcgaagtgcgcagtgctgcctcctggttcagcagtg
tctattctgaaagccctcttccaggatgtgcacgtacagtccatgatgttgaccgagcgc
gcatgtgtctacaacatactcatcagcctcatggactcaagagaaaaggagctgaagggt
ttgggtccagactttgtgtatggatttgtgcaggctgtagatggagaaagagatcctcgc
aacctactgctggccttccagatagccagaaacatcatccacagaggttatgacctcaat
cagtttacagaggagctctttgaagtcacatcctgctatttcccaatagacttcacgcct
ccacccaatgaccctcacgggatcaagcaggaggacctcatcctcgctctacgggcagtt
ctaaccggcacgccacgattcgcagagttcctggtaccattacttatcgagaagcttgac
tcagacgtccagaatgccaaggtggactccctgcagacgctggctgcttgtgcacctgtc
tatggacacaaagagctggccgagttcctcccagggctctggtcctccatacgcagagag
gtattccagacggcgagtgagagagtcgagtcagcaggtctctctgctcttagtgctatc
acgtcctgcctgtctcgcattgtgctcacgtcagactcgggagatgctctgcaaacattc
ctagagctcgtcctcaaagactgtcagcaccatctgtgtgagccagatctgaagctggtg
tggcctagtgctaagctgctgcaggctgcaagtggcgcctcctacagggcaagcctcata
gtgacagcagtggtgctgcctgcactgttcgagcagtacaactccagaactcagtgtgct
catcggcgcactctgttggaggtgttgcagggcttcatccagcccactgtgagcagccag
cctgcagaacaagaggacaacgtgctgttccccttccaaaagtctctctgcaacgtagtg
ttttctgccctggctgagtcaaatgcatctcttcaagtcacagctacaaaagttcttgcc
acactgggccagcaatctggcctgttactggagacagatgtggaaatagcggtggatcac
ctgacgaggctcgtcgtagaagaggacgacgtacaagtcagtttggcagtaatggagtgc
gcaggatctctggctcgtctccatccggctgttttcgctccccgaatggttccaagactg
aaggatgaaatattcacagaacccatggctgaaggagacacctccactcaccctcatagt
cgaagcaaagcagcagcagcacgagagcgcagtgtgacggctctcgcctacatctcgtcg
cagctcagcgtggtgcaggagagcgcccatgtactactgcaggtcttatctgctgcacat
aaaggaagcagcagtttctccacagaggaggtgatttcagtgtgtcgcagtctgcagagg
atagccgagcatgctcagcacacagtggaaattggtgactttttccacaaagttgtcatt
ccacgattactgggtctgtccctgcatgcagctctgcagagtcagaagtgctcgggtcac
actagtcccctcacagaagaggccatactgtctgctatagttcctgtcataagcactgct
tgtgcagcactacagccagtacccgctactcaaatggctgcgcaggtcgtttcccttttc
ttagatggagatgtatcgtgcctgccagaaaacgcctacccgtcccagattcagctgctc
gagagccagtcagactgttggtcccagtcacagctggtgtgtttgctcatggcctctgtg
tgttccctttcacaacaggtggacattcctgattttgacaggcttctagtccagttggag
gagctgatttttacatgtccacacgcgttctcctacacatccgcagctaagtgttatgcc
ggcctgatcaacaaaagagcagcaggccaagccctggatgctgttctggagaagaccttg
aaaagaataagtgcaacgttaaactgtgaatcctcggcacagcgagttcaagccttcact
ttactgatctgggtggtcaaggctttgcttctgcgctaccatcctctgttagtgaactta
actgacaagctcttctgccttctgagtgatgatcagttaggttctcaggcagcagacagt
ttctcgctacttatgagtgattctccagatgtgctgaaccgcagctgccatgccaatgtg
cgcattatgtaccgccagcgattctttacggagaactctgctaaacttgttcagggcttc
aactgtgcagagcaagagaagaggtctgtatttctgaaggccttgtcacacatcgtcaat
aatctgcccagacaagtgcaactctcagagcttcctgctttgctgcccctgcttttagaa
gcattgtcgtgtcccgatgaggcggtgcagctctccactctctcctgccttcagccactg
ctcatggaacctccacccgctctcaccacacagctggaggctcttttcacccgtctgctc
gctctaaccaccagccctgctatgaaagtgaggaaaagcgccttgtgctgcgtccacgcc
ctgtctcgcctccctagtcacatggtgttgcctttccgtgccagggtgctgcgcactctt
gctaagccactagatgacaagaagagactggtgaggaaggaggcggtagcagcccgtagt
gaatggtttttgttagggagtccaggaggaaggtga

DBGET integrated database retrieval system