KEGG   Ictalurus punctatus (channel catfish): 108273917
Entry
108273917         CDS       T04658                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03020  RNA polymerase
ipu04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108273917
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    108273917
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ipu03021]
    108273917
Transcription machinery [BR:ipu03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     108273917
SSDB
Motif
Pfam: RPC5 RPC5_C BAG
Other DBs
NCBI-GeneID: 108273917
NCBI-ProteinID: XP_017339096
Ensembl: ENSIPUG00000006055
UniProt: W5U7M1
LinkDB
Position
13:9997016..10016919
AA seq 698 aa
MASGEEDDPIIQEIDVYLAKSLSDKLYLFQYPVRPANMNYDDMTHLTAKIKPKQQKVEIE
VAIDTMSPNYCRSKGEQIALNVDGTSLEDSSTYSIKMMDKQTFSSIQATTNTSRYAAAVF
RKGELHLTPLQGILQMRPSFSYLDKADSKHKEREAANEAGDSSQDEAEEDTKQITVRFSR
PESEQARQRRIQSYEFLQKKQAEEPWVHLHYHGLKDGRSEHERQYLYCQAMDTTENTELV
KTPSEYLTMLMPPLTEEKVVKPMGPSNVLSMAQLRTLPLGDQVKTLMKNVKVMPFANLMG
LLASGTDSTAVMRCIQQVAMLVQGNWVVKSDVLYPKSTCSPHSGVPAEVLCRGRDFVMWR
FTNERSLMRKEVAALTKLPPEDVKDFLEQMAVPRANRGWEFLLPTDHDFVKKHPDVAQRQ
HMLWLGIQNKLEKVFNFSKEDFLHKKDAQMDSVHVSGEQRLKAARENARERHTSLQKELD
ARRLKAASMSSGSGGTNTTVQIKEEPMSDSEEPMDTSSSVPNGSVNGYPSSDSPNTDLHS
EYGAAQSPTPELQDFVRSTFRKHFVLCLSEVKRLFNLHLASLPTGHSRFGHVTDRMLQDT
ILHSHCKQILVPFPPQSSASADEQKVFGLWENGETFDKHRQVLFEIFMKNYRVRRNIIQT
RLTQELGDAVTKADVDRLLKECCISLGGMWYLKGTVQS
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggccagcggagaggaggatgaccccattatacaagagattgatgtgtaccttgccaaa
agtctttcagacaagctgtatttgttccagtatcctgtgcgtcctgctaatatgaactat
gacgacatgactcatttaacagcaaaaattaaacccaagcagcaaaaggttgaaattgag
gtggcgattgacaccatgagtccgaactactgccgcagtaaaggggagcagattgcgctg
aacgtggacggcacgtcactggaagactccagcacttactccattaaaatgatggataag
caaacattctcatcgattcaggcaacaacaaatacgagtcgctatgctgctgcagtgttt
cgtaaaggtgagcttcacctcacgccattacagggcattctgcagatgaggcccagcttt
tcatatctagataaagctgacagtaaacacaaggaaagggaggcagccaatgaagctgga
gactcctctcaggatgaggcggaggaagataccaagcagatcaccgtgaggttttccagg
ccggagtctgagcaggcccgtcagcggcgcatccagtcctacgagttcctgcagaaaaaa
caggctgaagaaccgtgggttcatttacactaccacggtttaaaggatgggcgctcggag
cacgaacgtcagtatctttactgccaggccatggataccaccgagaacacggagttagtg
aaaacgccaagtgagtatctgaccatgcttatgcctccactgacggaagaaaaagtggtt
aagccaatgggacctagtaacgtgctttctatggcccaactacgtacattgccacttgga
gatcaggtgaagaccttgatgaagaacgtcaaggtcatgccgtttgccaatctgatgggg
ctgcttgcttcgggcacagactccactgcagtaatgcgctgcatacagcaggtggcgatg
ctcgtccagggaaactgggttgtcaagagcgacgtcctgtatcccaagtccacctgcagt
ccgcacagcggcgtgcctgcagaggtgctctgtaggggccgcgactttgtgatgtggaga
ttcacaaacgagcgatcgctcatgagaaaagaagtcgctgctctcacaaagctgcctcct
gaggacgtcaaggactttttggaacagatggctgttcccagagcaaacagaggctgggag
ttcctgctgcctacagaccacgattttgtcaagaagcatcctgatgtggctcagagacag
cacatgctgtggctgggcatccagaacaagttagaaaaagttttcaacttctcaaaggag
gacttcctgcacaagaaggatgcgcaaatggactcggttcatgttagcggtgagcagcgt
ctcaaggcagctcgcgagaatgcacgggagcgtcatacctctctgcagaaagaattggac
gcccgaagactgaaggccgcctccatgtcttctggctccggtgggactaatacaacagtg
cagattaaagaagaacccatgagcgactctgaagagcctatggacacgtccagttcagtt
ccaaacggttcagtcaacggttatccctcatcagactcccctaacacggacctccacagt
gagtacggggcagcgcagtcccctaccccagagctccaagactttgtacggagcactttc
cggaaacactttgtgctgtgcctcagcgaggtcaaacgcctgttcaacctgcacctggcc
agccttcctacaggacacagccggttcggccacgtcacagaccgcatgctccaggacacg
atcctccacagccactgcaaacagatcctagtgccttttccccctcagagcagtgctagt
gcagacgaacagaaagtctttggcttatgggagaatggtgaaacgtttgataagcaccgc
caagttctgtttgagatctttatgaagaactatcgcgtaaggagaaacattattcagacc
cgactcacacaggagctcggtgatgctgtcaccaaggctgacgtggacaggctgctcaag
gaatgttgcatcagcctagggggtatgtggtatctgaagggcactgtgcagtcgtga

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