KEGG   Ictalurus punctatus (channel catfish): 108273949
Entry
108273949         CDS       T04658                                 
Symbol
sgca
Name
(RefSeq) alpha-sarcoglycan
  KO
K12565  alpha-sarcoglycan
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108273949 (sgca)
SSDB
Motif
Pfam: Sarcoglycan_2 Sarcoglycan_2_C FAM163
Other DBs
NCBI-GeneID: 108273949
NCBI-ProteinID: XP_017339149
Ensembl: ENSIPUG00000015035
UniProt: W5UD10
LinkDB
Position
13:4499356..4512389
AA seq 402 aa
MADRGNWVLTLSVCMVYLLVVQADIIKHAPVGQLFVHELNREVYQNEFEPFLKHYGRVYN
DPMVFKCNKQQFPDLPRWLRFTQRHPYDNGFLYGTPLPQDLGKSIIEVFVTNKRSYETFK
DRLVINVGHAEKLLPYQAEFFIGLREIEKALPFEVQEEIKQDIQLIWGTDRLDYVNITSA
LDRGGRVPLPLPGHYEGVYVKLGSDQPYSKCLQRLQTADHLRECEAGGKISGDCSVCSIP
ANCVTWCKSALIDLSRPVPPTPAPTMGSGILAWGGEFMPPDSPPERDFIPDYIVTIIVPF
ALAILLCLILAYVMCCRREGVQKRDAMTPEIQLYHHHTIQGNSSELRNMAGNRSSAPQPL
STMPMFNTRTGQRAPPDYPSDSVHIPLIMAQQEPNVDTLPRK
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggcagatagagggaactgggttttaacactttcagtgtgtatggtctatttgctggtg
gtccaagcagacatcataaaacatgctcctgtgggccagctgtttgtccatgagctaaac
cgagaagtctaccagaatgaatttgagccattcctcaaacactatgggcgtgtgtataat
gaccccatggtgttcaaatgcaacaagcagcagttcccagacctgccacgctggctgcgc
ttcacacagcgccacccgtatgacaatggcttcctgtatggcacaccgctgccccaagac
ctgggcaagagcatcattgaggtttttgtgacaaataaacgaagttatgagactttcaaa
gaccgccttgttataaatgttgggcatgcagaaaaactgttgccttaccaggctgaattc
ttcattgggctgagggagattgagaaggccttaccgtttgaggttcaagaggagataaag
caggatatccagctgatctggggaaccgatcgactcgactatgtcaacatcacctctgct
ctggaccgtggtggacgtgtccctctgcctctgcctggacattatgagggggtgtatgtg
aagttggggtcagatcaaccgtactccaaatgcctgcagaggctgcagacagcagatcat
ctgagggagtgtgaggccggagggaagatcagtggagattgcagtgtgtgcagcatccct
gctaactgtgtgacctggtgcaagtcagctctgattgatttatccaggcctgtgcctcct
actccggcaccaaccatgggttcaggtattctggcatggggaggagagtttatgccacct
gactctccacctgagagagacttcatccctgactacatagttaccattattgtgcccttc
gctctcgccatcctcctctgcctcattctagcttacgtgatgtgctgcaggagagaagga
gttcagaagcgtgatgccatgactcccgagatccagctttaccatcatcacaccatccaa
gggaacagcagtgagctgcggaacatggcaggcaaccgtagtagtgcaccacagcccctg
tctacaatgcctatgtttaacacccgaactgggcagagggcacctccagactatccctcc
gacagcgtccacatccccctcatcatggcccagcaggagcctaatgttgatacgctgccc
aggaaataa

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