Ictalurus punctatus (channel catfish): 108273949
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Entry
108273949 CDS
T04658
Symbol
sgca
Name
(RefSeq) alpha-sarcoglycan
KO
K12565
alpha-sarcoglycan
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108273949 (sgca)
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Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
FAM163
Motif
Other DBs
NCBI-GeneID:
108273949
NCBI-ProteinID:
XP_017339149
Ensembl:
ENSIPUG00000015035
UniProt:
W5UD10
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Position
13:4499356..4512389
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AA seq
402 aa
AA seq
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MADRGNWVLTLSVCMVYLLVVQADIIKHAPVGQLFVHELNREVYQNEFEPFLKHYGRVYN
DPMVFKCNKQQFPDLPRWLRFTQRHPYDNGFLYGTPLPQDLGKSIIEVFVTNKRSYETFK
DRLVINVGHAEKLLPYQAEFFIGLREIEKALPFEVQEEIKQDIQLIWGTDRLDYVNITSA
LDRGGRVPLPLPGHYEGVYVKLGSDQPYSKCLQRLQTADHLRECEAGGKISGDCSVCSIP
ANCVTWCKSALIDLSRPVPPTPAPTMGSGILAWGGEFMPPDSPPERDFIPDYIVTIIVPF
ALAILLCLILAYVMCCRREGVQKRDAMTPEIQLYHHHTIQGNSSELRNMAGNRSSAPQPL
STMPMFNTRTGQRAPPDYPSDSVHIPLIMAQQEPNVDTLPRK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagagggaactgggttttaacactttcagtgtgtatggtctatttgctggtg
gtccaagcagacatcataaaacatgctcctgtgggccagctgtttgtccatgagctaaac
cgagaagtctaccagaatgaatttgagccattcctcaaacactatgggcgtgtgtataat
gaccccatggtgttcaaatgcaacaagcagcagttcccagacctgccacgctggctgcgc
ttcacacagcgccacccgtatgacaatggcttcctgtatggcacaccgctgccccaagac
ctgggcaagagcatcattgaggtttttgtgacaaataaacgaagttatgagactttcaaa
gaccgccttgttataaatgttgggcatgcagaaaaactgttgccttaccaggctgaattc
ttcattgggctgagggagattgagaaggccttaccgtttgaggttcaagaggagataaag
caggatatccagctgatctggggaaccgatcgactcgactatgtcaacatcacctctgct
ctggaccgtggtggacgtgtccctctgcctctgcctggacattatgagggggtgtatgtg
aagttggggtcagatcaaccgtactccaaatgcctgcagaggctgcagacagcagatcat
ctgagggagtgtgaggccggagggaagatcagtggagattgcagtgtgtgcagcatccct
gctaactgtgtgacctggtgcaagtcagctctgattgatttatccaggcctgtgcctcct
actccggcaccaaccatgggttcaggtattctggcatggggaggagagtttatgccacct
gactctccacctgagagagacttcatccctgactacatagttaccattattgtgcccttc
gctctcgccatcctcctctgcctcattctagcttacgtgatgtgctgcaggagagaagga
gttcagaagcgtgatgccatgactcccgagatccagctttaccatcatcacaccatccaa
gggaacagcagtgagctgcggaacatggcaggcaaccgtagtagtgcaccacagcccctg
tctacaatgcctatgtttaacacccgaactgggcagagggcacctccagactatccctcc
gacagcgtccacatccccctcatcatggcccagcaggagcctaatgttgatacgctgccc
aggaaataa
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