Ictalurus punctatus (channel catfish): 108273967
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Entry
108273967 CDS
T04658
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3
KO
K22991
WD repeat-containing protein 45
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108273967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108273967
Membrane trafficking [BR:
ipu04131
]
Autophagy
Other autophagy associated proteins
Others
108273967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_Vps41
ANAPC4_WD40
BCAS3_WD40
WD40_Prp19
WD40
Beta-prop_IFT122_2nd
Beta-prop_HPS5
WDR55
EIF3I
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF12
DUF5711
DUF1513
Motif
Other DBs
NCBI-GeneID:
108273967
NCBI-ProteinID:
XP_017339171
Ensembl:
ENSIPUG00000004637
UniProt:
W5UCN0
LinkDB
All DBs
Position
13:complement(11113039..11122944)
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AA seq
344 aa
AA seq
DB search
MNLLPSNPHGNGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEML
FRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMI
KVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHSGHVQIVDLANTERPPVD
IPAHEGALCCIALNLQGTRIATASEKGTLIRIFDTSAGHLIQELRRGSQTANIYCINFNQ
DASLICVSSDHGTVHIFAAEDPKRNKQSSLASASFLPKYFSSKWSFSKFQLPSGSPCVCA
FGTEPNAVIAICADGSYYKFLFNQKGECSRDVYAQFLEMTDEKI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaatttactaccatccaaccctcatggaaatggacttctgtatgctggatttaaccaa
gaccatggatgctttgcatgcgggatggaaaatggcttcagggtgtacaacacagatcct
cttaaagaaaaagagaaacaagagtttcttgagggtggagtcgggcatgttgagatgctc
tttcgatgcaactaccttgcacttgttggaggaggcaagaaacccaagtacccacctaat
aaagtgatgatctgggatgatcttaagaaaaagactgtgattgagattgagttttccaca
gaagtcaaagctgttaagcttcgaagagacagaattgtggtggtcctggattcaatgatc
aaagtcttcactttcacacacaacccgcaccagctgcatgtctttgaaacatgctacaac
cctaaaggtttgtgtgttctgtgtccaaacagcaacaactctttgctagcatttcccggc
acccactctggacatgtgcagatagtagacttggccaacacagagaggcctcctgtggac
attcctgctcacgaaggagctctgtgttgtatcgccctcaacctccagggcacacggata
gccacagcttcggaaaaagggactctgatcagaatatttgacacatcagcgggtcatctg
attcaggagttaagacgaggatcgcagactgcaaacatatattgcattaacttcaaccag
gatgcgtctctcatctgtgtgtcgagtgaccatgggactgtccacatatttgctgcagaa
gatcccaaaaggaacaagcaatcaagcttggcctcagccagtttcctacccaagtatttc
agctccaagtggagtttctcaaagttccagctcccatctggctcaccctgtgtctgtgcc
tttggaactgagcccaatgcagtcatagccatttgtgctgatggcagctattacaagttc
ctgttcaaccaaaaaggggagtgttccagggatgtatatgcccagttcttggaaatgacc
gacgagaagatctga
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