Ictalurus punctatus (channel catfish): 108273969
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Entry
108273969 CDS
T04658
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108273969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108273969
Membrane trafficking [BR:
ipu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108273969
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
108273969
NCBI-ProteinID:
XP_017339175
Ensembl:
ENSIPUG00000013053
UniProt:
A0A2D0S9Q3
LinkDB
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Position
13:complement(16715924..16737852)
Genome browser
AA seq
1259 aa
AA seq
DB search
MNVNQQPHMASPYGQPQSGYQGNPHSGYGGQQLPGGYVGPYAPYNGPASNYQTGPPQGYS
PYASFPSKALAANLVSDLSSSSPLDLGMRGPPTSGAPPVSAAQPYSQFGQSEVQNGPPSM
GAPPQRPSASQPYTQGSVSLSGPQPAYPQQFGAPPTTMQQVTNQMAGMQVGSTIPSSAGP
GYALPAISQAPVPAPPSSFVPTAPVPTRPPPTSGPPHTPAQSYYGAPPAHQPFPATAPPF
SSAPGPTQLPPPPLASQQTFSQASPLSQPQFSSAPPTGPAALYGGPPPSVQATHSRAPLP
TSQPSAFSGGPPPSSAPSQYSTTMPPASQPSPFHSGPPPPTTAPGFPPQAGAPPRPPHSG
MQGPPMASQGPPMASQGLPMASQGPPMSQVNHVTPPQPGMLHGPTTPGMAPPQPGMQGYP
PQQNGAFGQVRAPQPGYGGPYSGQQGYGAQPSAQAPPPAAKRLDPDSIPSPQASDIPPVQ
KTRHRIDPDAIPSPIQVIEDDKANKSNEPFVTGVRGQAPPLVTTNFHVKDQGNASPRFIR
CTAYNMPCTSDMAKQSQVPLAAVIKPLATLPPDENPPYIVDHGESGPIRCNRCKAYMCPY
MQFIEGGRRFQCSFCNCVTEVPPHYFQHLDHTGKRVDCYDRPELSLGSYEFVATVDYCKN
NKIPQPPAFIFLIDVSYNAVKSGMVRIVCQELKSLLDYLPRENPDMDSNIRVGFVTYNKV
LHFYNVKASLAQPQMMVVSDVADMFVPLLDGFLVNVSESRVVIESLLDQIPEMFADTRET
ETVFGPVIQAGLEALKAADCVGKLFVFHTSLPIAEAPGKLKNREDKKLVGTDKEKTLFQP
QVSFYANLVKDCVAQGCCVDLFLFPNQYVDVATLGVVPTSTGGSIYKYTYFQAQSDQERF
LNDLRNDVQKQVGFDAVMRVRTSTGIRATDFLGSFYMSNTTDVELACLDCDKTITVEFKH
DDKLSEETGALIQCAVLYTSCGGQRRLRIHNMAVNCCAQLADLYRNCETDTIINFFAKYA
YRSVLNNPTKNVRDSLVNQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSD
VLHPGADVSLDDRAYLRQLVSAMDVAESHVFFYPRLLPVHKLDVESDALPVAVRDSEERL
SKGGIYLLETGLNLFLWVGVNTQQELLQNIFGTPAFSQIDPNMTSLPMLDNPYSKRLREI
IESFRTQRSRYMKLVVVKQEDKLELIFKHFLVEDKNNSGGASYVDFLCHMHKEIRTLLS
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaaccagcaacctcacatggcctctccttacggacagccacagtctggctac
cagggcaacccacactccggttatgggggtcagcaattgcccgggggttatgtgggtccg
tatgctccgtacaacggacctgcgtctaattaccaaacaggcccacctcaaggatattct
ccttatgcaagctttccttctaaggctcttgcagcaaacttagtctctgacctgtcctct
tcctctcctcttgacttaggtatgagaggaccccccacctctggtgcacccccagtgtct
gcagctcagccctattcacagtttgggcagagtgaagtacagaatggaccaccttctatg
ggtgcccctccacaaaggccatctgcgtctcagccgtacactcaaggatcagtgagcttg
tcaggtcctcagcctgcatacccccagcagtttggagcaccacccaccactatgcagcag
gtgaccaatcagatggcaggcatgcaggttgggtccactataccctcctcagctggcccg
ggctacgctctacctgccatctcccaggctcctgttccagctcctccatcctcttttgtt
cccacggctcctgtccccactcggcccccgcccacctcgggtccgccacatacaccagct
cagtcgtactacggagctcctcctgctcatcaaccattcccagctacagccccacctttc
tcgtctgcacctggtcctacccagctccctcctccacccttggcttcacagcagactttc
agtcaggcctctcctctttcacagcctcagttttcatcagccccacctacaggccctgct
gcattgtatggaggcccacctccatcagtgcaggccactcactctagagcaccccttccc
acttcccagccttcagctttctccggagggcctccaccgagctctgcgccatcccagtac
tcaacaaccatgccccctgcatcacagccttctccattccactcaggtcctcctccaccc
accactgctcctggatttccacctcaagcaggtgcacctcctaggcctccacactcaggc
atgcaggggcctcctatggcctcccaggggcctcctatggcctcccaggggcttcctatg
gcctcccaggggcctcctatgtcccaagtgaatcatgtgacccctccacaacccgggatg
ttgcatggacccaccactcccggaatggcaccaccacagccagggatgcagggttatcca
cctcagcagaacggtgcttttgggcaagtgagagctcctcagcctggctatggtggacca
tattctgggcagcaaggctacggagctcagccctctgcacaagcccctcctcctgcagcg
aagagacttgacccggactccattcccagcccgcaagcctctgacataccgcctgtgcag
aaaacaagacatagaatagacccagacgctattcccagcccaattcaggtgattgaggat
gacaaggcaaacaaaagcaatgagccttttgtcactggggtcagaggtcaagccccaccc
ctcgtcactaccaacttccatgttaaagatcaagggaatgcgagtccacgtttcatccgt
tgcacagcttataacatgccatgtacctcagacatggccaaacagtcccaggtgccgctg
gctgcagttatcaaaccactggctactctgcctccagatgagaatcctccttatatagtg
gatcatggggaaagcggtcctattcgctgtaatcgctgtaaggcttacatgtgtccctac
atgcagttcatagaaggtggaagacgcttccagtgtagcttctgcaactgtgtcacggaa
gtgcctccccattatttccagcatctggaccacacagggaagcgtgtagactgctacgac
cgacccgagctgtccctgggcagctacgaatttgtagccacagtggattattgtaagaac
aacaagattcctcagcctccagccttcatcttcttaattgatgtgtcatacaatgctgtg
aaaagtggcatggtgaggattgtatgccaggagcttaaaagcctgttggactatttgccc
agagagaaccctgatatggattccaatatacgagtaggctttgtaacctacaacaaagtg
ctgcacttctataatgtaaaggcttctctggcccaacctcagatgatggtggtctcagat
gtggcagacatgtttgtacccttgttggatggattccttgtcaatgtctccgagtccagg
gttgtcattgagagtttgctggatcagatccccgagatgtttgctgacacacgagagacg
gagacagtgtttggccctgttatccaagctggactggaagcgcttaaggctgcagactgt
gttggaaagctgtttgtcttccatacctctttgcccatcgctgaagctccaggcaagctg
aagaacagggaagacaaaaaactggtgggcaccgacaaagaaaagacattattccagccc
caagtgagcttctatgctaacctggtgaaagattgtgtggcacagggctgttgtgtggat
ctcttcctgttccctaatcagtatgtagacgtggcaacattaggggtggtacccacttca
actggaggttccatctacaaatacacctatttccaggcccagtctgaccaggagcggttt
ctgaacgatctgaggaacgatgtgcagaagcaggtgggctttgatgcggtgatgagggtc
cgcacaagcactggtatccgggccacagactttttaggttcattctacatgagcaacacc
acagatgtcgagctggcgtgtctggactgtgacaaaaccatcacagtggagttcaaacat
gacgacaagctcagtgaggagactggcgcactcatccagtgtgctgtactatacaccagc
tgtggtggtcaacggcgactgcggatccataacatggcagtgaactgctgtgcacagctg
gctgacttgtacagaaactgtgaaacagacaccattatcaacttctttgctaagtatgca
taccgcagtgtactgaacaaccctaccaagaatgttcgagacagtctggtgaatcagtgt
gcccagatcctggcatgctatcgcaagaattgtgctagcccatcttcagctggacagctg
atcctcccagagtgcatgaagctacttcctgtgtatctcaactgtgtactgaagagtgat
gttctgcaccctggagcagacgtctccttggatgatcgcgcgtatctgagacagctggtc
agcgccatggatgtggcagagagccatgtgttcttttacccacggctgcttccagtgcac
aagttggatgtggagagtgatgctctgcctgtggcagtcagggactctgaagagagactg
tctaaggggggcatttaccttctggagactggcctgaaccttttcctttgggtgggagtc
aacacccagcaggagcttctccagaacatctttggcacccctgctttcagccagatcgat
cctaacatgacgtctttgccgatgttggataatccatactcgaagaggctgcgggagatt
atcgagtctttccgcacacagcgctctcgctacatgaagctggtggtggtgaagcaggaa
gacaaacttgagctcatctttaagcatttccttgtggaggacaaaaacaacagcggtggg
gcttcttatgtggacttcttgtgtcacatgcacaaggagattcgcacacttctgagctag
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integrated database retrieval system
