KEGG   Ictalurus punctatus (channel catfish): 108273979
Entry
108273979         CDS       T04658                                 
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
  KO
K08493  vesicle transport through interaction with t-SNAREs 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    108273979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108273979
Membrane trafficking [BR:ipu04131]
 SNARE
  SNAP-25[N] (Qb)
   Vti1
    108273979
SSDB
Motif
Pfam: V-SNARE V-SNARE_C Mer2 Sec8_N Sec20 Laminin_II DUF1664 CAP59_mtransfer
Other DBs
NCBI-GeneID: 108273979
NCBI-ProteinID: XP_017339194
Ensembl: ENSIPUG00000016354
UniProt: A0A2D0S8X7
LinkDB
Position
13:15429316..15546644
AA seq 217 aa
MSSDFEAYEQEFGTLTAEITNKIGRIPKLGGEDKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRAMYNSRLKSYKQEVEKLEKDFKRSRIAYSDEVRNELLGDDGGSSESQRAHLLD
NTERLERSSRRLETGYQIAVETEQIGQEILSNLHTDREKIQRSRERLRETDANLGKSSRV
LSGMLRRVIQNRILIFILGAILLLSIVLAIYFNLRSH
NT seq 654 nt   +upstreamnt  +downstreamnt
atgtcttcggattttgaagcctacgaacaggagtttggtactctcaccgcagaaattacc
aacaaaataggaagaataccgaaacttggtggagaggacaagacgcagctggttctaaat
gtcgacaaacagcttgaggaagtcagagagttgttggagcagatggacctggaggtacga
gagatccccattcagagcagagccatgtacaacagccgcctgaagagctacaaacaggaa
gtggagaagctcgagaaggactttaaaaggtcacgtattgcctacagtgatgaggtgcgg
aacgagctcctgggggatgatgggggctcctcagagagtcagagagcacatctgttggac
aacacagagaggctggaaaggtcatctcggagactggagactggctaccagatagcggtg
gaaaccgaacaaataggccaggagattctatccaatctacacactgaccgcgagaagatc
cagagatccagagagcggttgagagagactgatgcgaacttgggcaagagttcccgtgtc
ctttcaggcatgctgagaagggtcattcagaaccgtatcctgatcttcatcctgggcgcc
atcctcctcctctccatcgtcctggccatctatttcaatctgcgaagccactga

DBGET integrated database retrieval system