Ictalurus punctatus (channel catfish): 108273991
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Entry
108273991 CDS
T04658
Name
(RefSeq) AT-rich interactive domain-containing protein 5B isoform X1
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108273991
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
ARID
108273991
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
108273991
NCBI-ProteinID:
XP_017339220
Ensembl:
ENSIPUG00000007418
UniProt:
W6A384
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All DBs
Position
13:9302523..9406947
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AA seq
1185 aa
AA seq
DB search
MVRLMTCRVLFPQWVGSPCGLHGPYIFYKAFRFKLEAKARILSLGDFFFVRCKPEDPVCI
AELQLLWEERTTKQLLSSSKLYFLPEDTPQGRTVTHGEDEVIAVSEKVIVKLEDLVKWTV
WDSSCWNKGLHALPLKPSMLKELGKNGQRESLYRYRESTFNSGLNFKDVLREKAELGDDG
EDKRVLVLSYPQYCRYRSIIARLRERPASLLTDQVVLALGGIATLTSSTQILYCRDTFEH
PTLLENDSICDEFAPNLKGRPRKKKVPMCQRRDSQAQSGNTKEPGCVEARTPSKAKAETK
AVVSKPKSSSCKKVLAEEKSKEETGEECRAEEQAFLVALYKYMKERKTPIERIPYLGFKQ
INLWTMFQAAQKLGGYELITARRQWKNVYDELGGNPGSTSAATCTRRHYERLILPYERYT
KGEEDKPLPPIKPRKQEASVQEGSTKSKVPSTKRHKDEQNPKDFNEKDASAKVPEPDAED
IKDKEQLQEELMVKQEAQQSQVSSRIDGEAMSPNAEDGAVQLVLQEEETKPVLKKSWDGG
PHEAIKHASLPQDGMPLKSEDSEVFPIAASMPLRHSHPLPNCYTQDQWQHERAEYKAPSY
SLGKTEQAGVKDSQNHVGMVLPTLKQRPLHSLSVPEIPTERAELPTKEESFCYNPLLYPR
SNPGIMSPLAKKKMLSQVSGTGLASNFPYGPPPPLVNKKASSSSTEETASEQPGPQVPSS
TGEASVMIKRPSVIQHAQSFKPREDRRPAIETSHREVCGEREIYPSEQPQRQPLHHSQPS
PTGEPYIVRTNLHSSVEKSSEVPRPGQVPSFLGDFCSSPHLHSLYRQAEHHLSKEQLTKY
LNRETYPRDCETAHGFPQSQHPDSGSLTYSPRLNPKEKGPPSEKVTEEQPTDLSLPKPSS
HKLPHSTSSLCSLSHSMMQQDIKNTPLFQAGSSQSSSLDYHPRACRVPPMTVSTPKKVVE
PQLKAHSGRGEETVSYKIDELARPILSTKSSPQNVGAARPLKRNLEELENGPTEKKIRAV
TPMHCSTPRDVPVKVRTPEPDNESMKPAEPAHAVHINSYAAEGHKFPMHSSIFPGLYPGA
FVSQVQEMCDSLGPHAPPGYSHPLQYLKNQAVISPLMPQFAIHSIMMQRQFLAQAANPAH
LYRHPMGTSYGDILHHGLYPMTALNPQPAFSPPQLSSVHPSTKLS
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggtgagattaatgacttgtcgtgtgctgtttccgcagtgggtcggctcaccttgtggc
ttgcacggaccgtacattttctacaaggcgtttcggttcaagctcgaggccaaagcgagg
attttgtctctgggcgattttttcttcgtgcgctgtaaaccggaggacccggtgtgcata
gccgagctccagctgctctgggaagaaaggacaaccaagcaacttttatccagctccaaa
ctttattttctgccagaagatactccccagggaaggactgtcactcacggagaggacgaa
gtgatcgccgtgtcggagaaggtcatcgtgaagttggaagacttggtgaaatggacagtg
tgggattcatcgtgctggaacaagggcctgcatgcgctgcctctaaagccctcgatgctg
aaagagctgggcaagaatggccagagggaaagcctctaccgctaccgagagtccacgttc
aacagtggcctgaacttcaaggacgtcctgagggagaaggctgaactgggtgatgatggc
gaggataagagggtcctggtgctaagctatccacagtactgtcgctaccgctccatcatc
gcacggctccgtgagcggcctgcctcgctcctgacggaccaggtggtactagctctgggg
ggtatcgctacgctcacaagcagcactcagattctctactgcagggacacattcgagcac
cccacactgctggagaacgacagcatctgcgacgaatttgcacccaatttgaagggccgg
ccccggaagaagaaagtccccatgtgccagcgcagagactcgcaggcccagagtggaaac
accaaagagcccggctgtgtggaggccaggacacccagcaaggcgaaagcagaaacaaaa
gcagtggtttcgaaacctaagagcagcagctgcaaaaaggtattggccgaggagaagagt
aaggaggagacgggggaggagtgccgtgccgaagaacaggccttcctcgtggccctctac
aagtacatgaaagagaggaagacccctatagagcgaataccctatctaggtttcaagcag
ataaacctttggacgatgtttcaggctgctcagaagctgggaggatacgagctgatcaca
gcccgccgacagtggaaaaatgtatacgacgagttgggtggaaacccaggaagcaccagc
gccgccacgtgtacacggagacactacgagaggctaatcttgccctatgagagatatacg
aaaggagaggaggacaagccactacctcccatcaagccccgaaagcaagaggccagcgtg
caggaggggagcaccaagtcaaaggtgccgtccacaaagcgccacaaagacgagcaaaat
ccaaaggactttaacgaaaaggacgcctcggctaaagtccccgagccggatgcagaggac
ataaaggacaaggaacagcttcaggaagaactgatggtgaagcaagaggcacagcagtcc
caagtttcatcccggatagatggcgaggcaatgagtcccaacgcagaggatggggccgtg
cagctggttctccaggaggaggagacgaaaccagtgctcaagaaatcctgggatggtggt
ccacatgaagcaatcaaacatgcatcgcttccacaggatggcatgccactcaaatctgag
gactctgaagtgttccccattgctgcgtctatgccactacggcactcccacccccttccc
aactgttacacacaggaccagtggcagcatgagagagcagaatacaaggcaccttcatac
tccctgggaaagacagaacaggctggtgtaaaagacagccaaaaccatgtaggaatggtg
ctacccaccttgaaacaaagacctctgcactccctctccgtaccagagatcccaacagag
agggctgaactccccaccaaggaggagagcttctgctacaatccactcttgtatcctagg
agcaaccctggtatcatgtcccccctagctaagaagaagatgctgtcacaagtaagtggc
actggcttggccagcaatttcccctatggtccacctcccccattagtcaacaaaaaggca
tcaagcagtagtacagaagaaaccgcttctgagcaaccgggaccccaggtcccttcctct
acaggtgaggcaagtgtgatgatcaagcgtccgtctgtcatccagcatgctcagagtttc
aagcctcgcgaggacagaagacctgctattgaaacctcgcatagagaggtgtgtggtgag
agggagatatacccttctgaacaaccccagcgtcagcctcttcaccactcacagcccagc
cctacaggagaaccctacattgtgagaaccaatcttcattccagtgtggagaaatccagt
gaggtacctcgccctgggcaggtgccaagtttcctgggtgatttctgctcctcaccacac
ctgcacagcctctaccgacaggcagagcaccatctaagcaaggaacagctaaccaagtac
ctaaacagagagacttacccacgggactgtgaaactgcacatggtttccctcagagtcag
catcctgacagtggaagtctgacttactcgccccgtctgaatccaaaagagaaaggccct
cctagtgaaaaggtcacagaggagcaaccaacagatctgagtctcccaaaaccctcttca
cacaaattgccccactccacttcatctctgtgcagcctctcacattccatgatgcagcag
gacattaaaaacactcctctttttcaggcaggtagcagtcaaagttcaagcctggactat
caccccagagcctgtcgtgttcctcctatgactgtgtccactccaaaaaaggtggttgaa
ccccagctcaaagcacacagtggccgaggagaagagacagttagctacaagatagacgaa
ctggctcggcctatcctaagcaccaaaagtagcccacagaatgttggtgcggcacggccc
cttaaacgtaatctagaggagttggagaatggaccaaccgagaagaagattcgggctgtg
acccccatgcactgctccacgcctagagatgtcccggttaaagtgcggaccccagagccc
gacaatgaatccatgaagccggctgagccggcacacgcggtgcacatcaacagctatgct
gctgagggacacaagttcccaatgcactcctccatcttcccaggactgtatcctggggca
tttgtttctcaggttcaggaaatgtgtgacagcctgggccctcatgccccccctggttat
tcgcatccactgcagtacttgaagaaccaggctgtcatctcaccactcatgccccagttt
gccatccattccataatgatgcagagacagttcttggcccaggcggccaatccagcccac
ctgtacaggcacccaatggggacttcatatggagacattctccatcatggcctttacccc
atgacagccctcaatcctcagccagctttcagtcccccacagctctcctcagttcatcct
agcaccaaactctcttaa
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