Ictalurus punctatus (channel catfish): 108274033
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Entry
108274033 CDS
T04658
Name
(RefSeq) DNA topoisomerase 2-alpha
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108274033
03036 Chromosome and associated proteins [BR:
ipu03036
]
108274033
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
108274033
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Topoisomerases
108274033
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
108274033
Centrosome formation proteins
Centriole proteins
108274033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
108274033
NCBI-ProteinID:
XP_017339303
Ensembl:
ENSIPUG00000020828
UniProt:
W5U7Z3
LinkDB
All DBs
Position
13:1264772..1275363
Genome browser
AA seq
1581 aa
AA seq
DB search
MAATEAPLKALFENKGPSKVKKNAEHLSVERIYQKKTQLEHILLRPDTYIGSVEPVKQQM
WVFDEVVGMNCRDITYVPGLYKIFDEILVNAADNKQRDSSMNCIKITIDPENNTISIWNN
GKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDQKKVTGGRNGYGAKLCNIFSTKFTVET
ACRESKHCFKQTWYDNMGRAGESKIKPFSGDDYTCITFQPDLSKFKMESLDRDTVALLTR
RAYDIAGSTRGVKVYLNGTKLPVNGFRSYVDLYVNGRTDETGSPLTVVHEVVNPRWEVCL
TMSEKGFQQVSFVNSIATTKGGRHTDYVADQIVTKMIEVVKKKNKGGVAVKPFQVKNHMW
LFVNCLIENPSFDSQTKENMTLQQKSFGSTCTLGEKFIKQANSCGIVESVMNWVKFKAQT
QLNKKCSAVKHTKIKGVPKLDDANDAGGKNSAGCTLILTEGDSAKTLAVSGLGVVGRDRY
GVFPLRGKMLNVREASHKQIMENAEINNIIKILGLQYRKNYSDPESLKTLRYGRLMIMTD
QDQDGSHIKGLLINFIHHNWPSLLHHNFLEEFITPIIKASNKKQSLSFYSIPEFTEWKDK
QSNLKSWRIKYYKGLGTSTAQEAKEYFSDMPRHRIPFKYSGPADDEAITLAFSKKKVEER
KEWLTSFMINRRQRREHNLPEEYLYGKETTSLTYRDFVNKELVLFSNSDNERSIPCLVDG
LKPGQRKVMFCCMKRNDKREVKVAQLAGSVAEMSAYHHGETSLMMTIVGLAQNFVGSNNL
NLLQPLGQFGTRLHGGKDSASPRYIFTMLSSLTRLLFPPVDDNLLKYNYDDNVRVEPEWY
VPIIPLVLANGADGIGTGWASRLPNYDVREIVSNIHRMLDGQEPQPMLPSYKGFKGTIEE
LTTNQYMNSGEVAIIDETTIEISELPVKTWTQTYKENVLEVMMNGSDKVPALITDYKEYH
TDTTVRFVVKMTEERLREAEAAGLHKVFKLQSPLTCNSMVLFDHVGSLKKYETVQDIMKD
FFELRLKYYVLRKDWLLGMLGAENAKLSNQARFILEKIQGTLVIENKPKKQLICMLQEMG
YDSDPVKAWKQSQEKEVEEEASDEDEEKEKEEETSGPDYNYLLSMPMWFLTKEKKDELCK
QRDAKMNELNVLEKKSPTDLWKEDLAAFTLELERVEQAERDAQVSVAQVKTKGGRAKVVK
VKNETMPTPQGRRVIPRITSAMKGQAVKKVVARKGKAKAGESDGSGMVIKMEFGGGEDEE
LQEMGLAARLTKKAKKEPKEKVSKSGKQTTLQFKPVKKEKKKKNTWSSDEEEEEESEEEG
SDVSGDAGDVAPRVRPGRKANAGVKYCLSDSEEEFKNWEGLGKKKARAVVEEDDDDDDDD
MFVPEPSESEQDSPAPPPLRKTQPKTKDEKEAVKSTLTSESSAASKLPPKPKEKAARKPA
AKKTTTAAASRKKGTATDVKQPSILDALSKPAAAKKSTAAKPQTSSDSGNSDPAPAAKKA
AAARKRKTVLSSDESDSDSDGGNLMARLKGKAAAAGKKSKRGDDESFSLDVTSSGVAPRS
KTARSTKPVTYVLDSDSDSDF
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaacggaagcaccactgaaggctttgttcgagaacaagggcccaagcaaagtg
aagaagaatgcagagcacctctccgtggagcgcatctaccagaagaagacgcagctggag
cacatcctgctccggccggacacctacatcgggtccgtggagcctgtcaagcagcaaatg
tgggtgtttgatgaagtggtcgggatgaactgcagggacatcacgtatgttcccggcctc
tacaagatctttgacgagatcctagtcaatgctgcggataacaagcagagggacagcagt
atgaactgtatcaagatcaccattgacccagagaacaacaccatcagcatctggaacaat
gggaaaggcattcctgtggtggagcacaaagtggagaaggtgtacgtgccggctctcatc
ttcggccagctgctcacctccagcaactacgacgacgaccagaagaaggtcacgggtggc
cgtaacggatacggcgccaagctgtgcaacatcttcagcaccaagttcaccgtggagaca
gcgtgcagggagtccaagcactgctttaaacagacgtggtacgacaacatgggccgtgcg
ggcgagtccaaaatcaagccgttcagcggcgatgactacacgtgcatcaccttccagcct
gatctgtccaagttcaagatggagtctctggaccgtgacacggtggcgctgctgaccagg
cgagcgtatgacatcgccggctccaccagaggcgtcaaggtgtacctcaacggcaccaag
ctgcctgtgaacgggttccgcagctacgtagacctgtacgtgaacggcaggacggacgag
actggttctccgctcaccgtagtgcacgaggtggtgaacccgcgctgggaggtctgtctc
accatgagtgagaagggcttccagcaagtcagcttcgtcaacagcatcgccaccaccaag
ggtggaagacacacagactatgtggccgaccagatcgtaaccaaaatgatcgaggtggtg
aagaagaagaacaagggcggtgttgcagtcaagccgttccaggtgaagaaccacatgtgg
ctgtttgtgaactgcctgatcgagaaccccagcttcgactcacagaccaaagagaacatg
acgctgcagcagaagagcttcggctccacctgtacactcggcgagaagttcattaaacag
gcgaacagctgcggcatcgtggagagcgtgatgaactgggtgaagtttaaagctcagact
cagctcaacaagaagtgctcggctgtcaaacacaccaagatcaagggcgtgcccaaactg
gacgacgccaacgacgcaggtggtaagaactcggccggctgcactctgatcctcacagag
ggagactcggccaagaccctggccgtgtccggactgggcgtggtgggccgcgatcgctac
ggcgttttccccttgcgtggaaaaatgctcaacgtgcgggaggcttcgcacaaacagatc
atggagaacgccgagatcaacaacatcatcaagatcctgggtctgcagtacaggaagaac
tacagcgaccccgagtcgctcaagacgctgcgctacggcaggctcatgatcatgactgat
caggatcaggatggctcacacatcaaagggcttctcatcaacttcatccaccacaactgg
ccctcgctgctgcaccacaacttcctggaggagttcatcacgcccatcatcaaggcgtcg
aataagaagcagtcgctctccttttacagcatcccagagttcaccgagtggaaagacaag
cagagcaacctgaaatcatggaggatcaagtactacaaaggtttgggtacaagcacagcc
caggaggctaaagagtatttctcggacatgccgagacaccgcatcccgtttaaatactcc
gggcccgccgacgacgaggccatcacccttgcctttagtaagaagaaagtggaagagaga
aaggagtggctcaccagcttcatgatcaacaggcgacagcgccgcgagcacaacctgccc
gaggagtatctgtatgggaaggagaccacgtcgctcacctacagagactttgtcaacaag
gagctagtgcttttctccaactcggacaacgagcgttctatcccgtgtctggtggacggt
ctgaagccgggccagcggaaggtgatgttctgctgcatgaagcgaaatgataaacgtgag
gtgaaggtggctcagctcgccggttctgtcgccgagatgtctgcctaccaccacggagag
acttctctgatgatgaccatcgtgggtctggcccagaactttgtaggcagcaacaatctg
aacctgttgcagcccctggggcagttcggtacacgccttcacggtggcaaagactccgcc
agccccagatacatcttcaccatgctcagttctctgactcggctgcttttcccccccgtg
gacgacaacctgctgaagtacaactacgacgacaacgtacgcgtggagcccgagtggtac
gttcccatcatcccgctcgtcctggccaacggcgccgatggcatcgggacgggctgggcc
agccgcctccccaactacgacgtgcgcgagatcgtcagcaacatacaccgcatgctcgac
ggccaggagcctcagcccatgttgcccagttataagggctttaaaggaacgatcgaggag
ctgactaccaaccagtacatgaacagtggcgaggtggccatcatcgacgagaccaccatc
gagatctcagagctgcccgtaaaaacctggactcagacgtacaaagagaacgtgctggag
gtgatgatgaacggctcagataaggttcccgccctgatcaccgattataaagagtaccac
acggacaccaccgtgcgcttcgtggtcaaaatgacggaggagaggctgcgcgaggccgag
gcggcgggcttgcacaaagtcttcaagctccagagcccgctaacctgcaactccatggtg
ctgtttgaccacgtggggagcctgaagaagtacgagacggtgcaggacatcatgaaggac
ttcttcgagctgcgtctgaagtactacgtgctgaggaaggactggctgctcggcatgctg
ggagccgaaaacgccaagctctccaaccaggcgcgcttcattctggagaagatccagggc
acgctcgtgatcgagaacaagcccaagaagcagctgatctgcatgctgcaggagatgggc
tacgactcggatcctgttaaagcctggaaacaatcccaggagaaggaagtggaggaagaa
gcgagcgacgaagacgaggagaaggaaaaagaggaggagacgtcaggaccggactataat
tacctcctgagcatgcccatgtggttcctcactaaagagaagaaagacgagctgtgcaag
cagagagacgcgaagatgaatgagttgaacgtgttggagaagaagtctcctacagatctg
tggaaggaggatctcgccgcctttaccttggagctcgagcgcgtggagcaggccgagcga
gacgcccaggtctcggtcgcccaggtcaagaccaaagggggccgggctaaggtggtgaag
gtgaaaaacgagaccatgcccactcctcagggccgacgcgtcattccacgcatcaccagc
gccatgaagggccaggctgtcaaaaaggtcgtagccaggaagggcaaagccaaggcgggc
gagagcgacggcagcggcatggtgattaagatggagttcggtggtggtgaggacgaggaa
cttcaggagatgggactcgccgctcgtctcaccaaaaaggccaagaaggaacccaaagag
aaagtttctaagtcagggaagcagaccacgctgcagtttaaacctgtcaagaaggagaag
aagaaaaagaacacttggtcgtctgacgaggaggaggaggaggagagcgaggaagaaggt
tcggacgtgtccggagatgcaggcgacgtggctcctagagtgcggcccggcagaaaagct
aacgctggtgtgaagtactgcctgtctgacagcgaggaggaatttaagaactgggaaggt
ttaggcaaaaagaaagctcgagcagttgttgaggaggatgatgatgatgatgatgatgac
atgttcgtcccagaacccagcgagagtgagcaggactcacctgctccgcctccactgaga
aaaacccagccaaaaacaaaggacgagaaggaggcggtgaagagcacgctcacctctgaa
agcagcgccgcttctaaacttccgcccaagcccaaagagaaagcggcgaggaaacctgcg
gcgaagaagactacgactgccgcggcgtccagaaagaaaggaacggcgacagatgtgaag
cagccatcgatcctcgacgcgctgtccaaacccgccgccgctaaaaagagcacggccgca
aaacctcagacctccagtgactccggaaactccgaccccgcaccggcagccaaaaaagca
gcagcagcgcgcaagaggaagacggtgctgagcagcgacgagtcggacagcgactcggac
ggaggaaacctcatggcccgcctcaaaggcaaggccgcagctgcaggaaagaaaagcaag
cggggcgacgacgagagcttttctttggacgtgacgtcctccggcgtggccccgaggagc
aaaacggcacgcagcacaaaaccggtcacctacgtgctggactctgactcggacagtgac
ttttaa
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integrated database retrieval system
