Ictalurus punctatus (channel catfish): 108274077
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Entry
108274077 CDS
T04658
Symbol
arhgap17a
Name
(RefSeq) rho GTPase-activating protein 17a isoform X1
KO
K20638
Rho GTPase-activating protein 17
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108274077 (arhgap17a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108274077 (arhgap17a)
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108274077 (arhgap17a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
RhoGAP
BAR_3
VMAP-M1
BAR_2
RapA_C
Motif
Other DBs
NCBI-GeneID:
108274077
NCBI-ProteinID:
XP_017339412
Ensembl:
ENSIPUG00000002195
UniProt:
A0A2D0S9J9
LinkDB
All DBs
Position
13:complement(12446676..12467459)
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AA seq
838 aa
AA seq
DB search
MKKQFNRMKQLANQTVGRAEKTEVLSDDLLQIERRMELVRAVSHNTHKRLVTCLQGQKKL
PLTALSQAMQDGGSQLGEESLIGKMMEVCGEAENRLASELMQHEIQIEKDILDPLNQLAE
VDIPNILKQRRQLAKLVLDYDSARTRWLQATKSIISGTNTQALSAKADSLKEEMDEAMNK
MELCKDQLSADLYNFFSKEGDYARYYVTLLEAQADYHRKSLSVLESVLPTIQAQQDSWTE
KPAFGTGLDEHLKRSSREIALPIEACVMMLLETGMKEEGLFRITAGASKLKKLKAALDCS
TSQLEEFYSDPHAVAGALKSYLRELPEPLMTYEFYDEWIQASNISDPDKRLQALWMTCDQ
LPKNNKANFRYLVKFLAKLAQESEINKMTPSNIAIVLGPNLLWAKTEGSLAEMAAATSVH
VVTIIEPIIQHADWFFPEDVEFNVSGMFSMPTPMTNHVNHLTLPDYDSGTIERKRPNSMV
GPDGDVAKRDSSANKLMEHNPRRGSTLTRKQHASPAFQPPLPPVEAVSIAGGQPVAELLI
QQPAPEGLGMEACQPSLALGMAALAAAQQLLAQQTEELSLKSSDAASTPQRNGCGSSHLS
VASPATGSSGHSPLLARRVIKKPAPAPPKPTNPPSGQPGSQSAPQSSCGTPQFLSPSPRP
LSTNSPSSLSPTQLVIQSSTLPRRYSGNQPPLQAPNHPPPEPPSQASVSPPQPTAVGDPG
EEPSPPSTPSPPKTPPLSMVPPENASTNVSPFPSGSLPRSRPVPKPRNRPTVPPPPQPQC
VASDTSDTNDIWSAAYKMMEPGMSFKGLNRVLVPDIDPEQQPVAQLKDSDLDSESTVL
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcagtttaatcggatgaaacaactcgccaaccagacagttggcagagctgaa
aaaaccgaagtcctcagcgatgacctgttacagatcgaacgtcgcatggagctggtgcgg
gctgtttcccacaacacacacaagagactggttacatgtctgcaggggcagaaaaagctc
ccactgacagcgttgtcacaagccatgcaagatggcgggagccaactaggagaggagtct
cttattgggaaaatgatggaggtgtgtggtgaggcggagaacagactggcgtctgagctg
atgcagcatgagattcagattgagaaggacattttagacccactaaatcagttagctgag
gtggacatccccaacatactcaagcagagaagacaacttgccaagctggtgctagactat
gattctgctcgaacaagatggttgcaggcaaccaagtctataatctcgggaacaaacaca
caagcgctgtccgccaaggcagactcgcttaaagaagagatggatgaagcaatgaacaaa
atggagctctgcaaggatcaactctctgccgacctgtacaatttcttttcaaaagagggg
gactatgcacgctactatgtaacgttattagaggctcaggcggattaccaccgaaaatct
ctctctgtgctggaaagtgtcctgccaaccattcaggcacagcaagactcatggacagag
aagccagcatttggaacaggcttggatgagcacctgaagcggagtagcagagagatagcg
ctacctatagaggcctgtgtgatgatgctgttggagacgggcatgaaggaagagggtctt
ttccgaataactgcaggagcctctaaactgaagaagcttaaggcagcgctggactgctcc
acctctcagctagaggagttctattctgacccacatgcagttgctggggctttgaagtcc
tacctgagggaactgccagagcctcttatgacttatgaattctatgatgagtggattcag
gcatccaatatatctgacccagacaaacggttacaagctttgtggatgacctgtgatcaa
ttaccaaagaacaacaaagccaactttaggtatctggtgaagttccttgctaagcttgct
caagaaagtgaaataaacaagatgacccccagcaacatcgcaattgtcttgggaccgaat
ctgttatgggcaaaaacagaggggagcctagcagaaatggcagctgctacctctgtccac
gtcgttactattattgagcccatcattcaacatgcagactggtttttccctgaagatgtg
gagttcaatgtatccggcatgttttcaatgcccacccccatgacaaaccatgtcaaccat
ctgaccctacccgactatgactcgggtacaatagagaggaagagacctaatagtatggtg
ggacctgatggtgacgtggccaaacgagacagctctgctaacaaattaatggagcacaat
ccccgtagaggcagtacactaactagaaagcagcacgcttcccctgccttccagccccct
ctgcccccggtggaggctgtcagtattgcaggaggccagcctgtagctgagctcctaata
cagcagcctgcaccagagggcctgggtatggaggcctgccagcctagcttggcactgggg
atggcagccctagcagcagcacagcagcttctagcccaacaaacggaggagctcagttta
aagtcgagtgacgcagcatccacacctcagagaaatggttgtggaagttcacatctgagt
gtggcatctccagcaacgggatcatcaggacacagccctctgttggcacgcagagttatt
aaaaagccggctcctgctcctcctaaaccaaccaatccaccttcaggtcagccgggcagc
cagtcagctccacagtcttcatgtgggactcctcaattcctctctccatctccaagacct
ctctccactaactctccaagcagtcttagccccactcagttagtaattcagtctagcacg
ttacctcggcgctattcaggcaaccagcctcccctccaggcccccaaccatccaccccca
gagccccccagccaggccagtgtttctccacctcagcccacagcagtcggagatccagga
gaggagccgtctccacccagtactcccagtccccctaaaactcctccactttccatggtc
cctcctgaaaatgcaagcacaaatgtttccccatttccgtctggctcccttcctcggtct
cgaccagtgcctaaaccacgcaacagacccactgttccgcctccaccacagcctcagtgt
gtggccagcgacaccagtgacacaaatgacatctggagtgctgcctacaaaatgatggaa
ccagggatgtcattcaaagggctaaaccgagtccttgttcctgacattgacccagaacaa
caacctgttgctcagctgaaggattcagacttggactcggagagcaccgtcctgtga
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integrated database retrieval system
