Ictalurus punctatus (channel catfish): 108274096
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Entry
108274096 CDS
T04658
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03040
Spliceosome
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108274096 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108274096 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108274096 (srsf2a)
Spliceosome [BR:
ipu03041
]
Common components
Common spliceosomal components
SR proteins
108274096 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
108274096
NCBI-ProteinID:
XP_017339447
Ensembl:
ENSIPUG00000004066
UniProt:
W5UTC9
LinkDB
All DBs
Position
13:25560571..25564329
Genome browser
AA seq
220 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGRRGGPPRRYGGYGRRSRSR
SPRRRRHSRSRSRSRSRSRSRSRYSRSRSKSYSRSRSRSKSRTPRRSKSKSPSRSRSRSK
SKSPSRSRSPRSNRASKSKSRSRSRSRPKSPEANGATQES
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggtagacctccgcccgacgttgagggcatgacctcgctgaaagtggacaac
ctgacttaccgaacctcgcctgagacgttgcggcgcgttttcgagaagtacggccgcgtc
ggagacgtgtacatcccgagagatcggtacacgaaggagagccgcgggttcgccttcgtg
cgcttccacgacaagcgagacgccgaggacgcgatggacgccatggacggcgcgctgctg
gacggacgcgagcttcgcgtgcaaatggcgcgctacggccgaccgccggattcgcactac
ggccgtcgcggaggacctccgcgcagatacggcgggtacggacggaggagtcgcagtcgc
agccccaggcgcaggaggcacagccgttcccgcagcaggagtcgctcccgctccagaagc
agatctcgctacagccgctccagatccaagtcctactcccgatctcgctcccgctctaag
agccgcacaccccgcaggagcaaatccaaatctccttccaggtcccgatccagatctaag
tccaagtctccttccaggagtcgcagtccccgttcgaacagagcgtccaaatccaagtca
aggtccaggtccaggagcagacccaaatcccccgaggccaatggagccacccaggagtca
tga
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integrated database retrieval system
